Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AL451062.2-201ENST00000427515 271 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC004129.2-201ENST00000457229 287 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC016925.1-201ENST00000458303 298 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RNU7-138P-201ENST00000459479 64 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 HMGB1P25-201ENST00000468402 607 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RN7SL41P-201ENST00000476144 297 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RPS17P5-201ENST00000498293 408 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC097462.2-201ENST00000504623 481 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RNU6-496P-201ENST00000516145 99 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC139365.2-201ENST00000517972 253 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 MRPS21P7-201ENST00000566937 238 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RPL7P50-201ENST00000600588 727 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AL158827.2-201ENST00000602494 330 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AL359881.1-201ENST00000602916 267 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 MIR7703-201ENST00000620784 77 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AL691447.3-201ENST00000635020 330 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC114947.2-201ENST00000565748 2125 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC007785.2-201ENST00000598627 1916 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC008758.3-201ENST00000507003 1829 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 AC110373.1-201ENST00000505994 3505 ntBASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3Q9BZ76 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL031119.1-201ENST00000404707 1879 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 Y_RNA.143-201ENST00000363520 106 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RNU6-1284P-201ENST00000363701 100 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 Y_RNA.400-201ENST00000383963 111 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RNA5SP87-201ENST00000384155 118 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 SNORD51-201ENST00000384320 80 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 U3.29-201ENST00000391296 212 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RPS4XP7-201ENST00000406274 780 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RNU2-52P-201ENST00000410680 190 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RNU5E-9P-201ENST00000411164 104 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AC007098.1-201ENST00000420122 367 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AC108075.1-201ENST00000424692 529 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AP001324.2-201ENST00000461163 319 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 RN7SL432P-201ENST00000484057 298 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 SCARNA13-201ENST00000516672 275 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 SYF2P1-201ENST00000550658 413 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AC007494.1-201ENST00000562293 760 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL670379.6-201ENST00000603753 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL670379.1-201ENST00000604752 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL590392.1-201ENST00000604960 446 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL670379.5-201ENST00000605253 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL670379.8-201ENST00000605353 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL670379.7-201ENST00000605823 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AC116447.1-201ENST00000613153 453 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AL731532.1-201ENST00000623972 4236 ntBASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3Q9BZ76 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
CNTNAP3Q9BZ76 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNTNAP3Q9BZ76 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 RNU105B-201ENST00000364478 208 ntBASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 Y_RNA.272-201ENST00000364696 102 ntBASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 RNU1-59P-201ENST00000364829 162 ntBASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 RNA5SP131-201ENST00000365452 119 ntBASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 DUTP5-201ENST00000406790 469 ntBASIC5.46□□□□□ -1.54
CNTNAP3Q9BZ76 RNU6-257P-201ENST00000410238 98 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms