Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MIR4744-201ENST00000581563 82 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC011193.2-201ENST00000582638 367 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SL475P-201ENST00000583379 298 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 DEFB117-201ENST00000602356 141 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC011603.4-201ENST00000611325 277 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 IGKV2OR2-10-201ENST00000613976 311 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 MRPL57P3-201ENST00000619218 176 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC107027.3-201ENST00000565095 3473 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC027575.3-201ENST00000583058 2747 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AL359976.1-201ENST00000418655 3528 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AC020633.1-201ENST00000468439 2247 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 AP001541.1-201ENST00000623322 1904 ntBASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-1Q9BYR8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL391516.1-201ENST00000554380 2449 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-873P-201ENST00000363833 107 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU1-146P-201ENST00000364015 165 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC074375.1-201ENST00000372993 192 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 Y_RNA.542-201ENST00000384641 111 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-578P-201ENST00000390980 103 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU1-56P-201ENST00000391303 164 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL136100.1-201ENST00000407696 330 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNU6-1064P-201ENST00000410626 104 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 DDX39BP1-205ENST00000422507 192 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL355433.1-201ENST00000422804 300 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC245884.2-201ENST00000426257 404 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC010095.1-201ENST00000443543 144 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL357134.1-201ENST00000445848 426 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL121578.2-201ENST00000448797 447 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 snoU13.29-201ENST00000459370 104 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SL456P-201ENST00000469290 295 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 KC877373.1-201ENST00000479066 408 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SL741P-201ENST00000482473 289 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RN7SKP179-201ENST00000516126 217 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNA5SP318-201ENST00000516352 92 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RNA5SP54-201ENST00000516951 92 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC022616.8-201ENST00000533569 253 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC133555.2-201ENST00000550213 292 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC018448.1-201ENST00000552843 316 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AL161713.1-201ENST00000555538 145 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC126915.2-201ENST00000610957 190 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 Y_RNA.802-201ENST00000614892 130 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 MIR3658-201ENST00000636291 56 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 AC116667.2-201ENST00000641075 823 ntBASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-1Q9BYR8 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.89
KRTAP3-1Q9BYR8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.89
KRTAP3-1Q9BYR8 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KRTAP3-1Q9BYR8 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
KRTAP3-1Q9BYR8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms