Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SNORD45A-201ENST00000384512 84 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 SNORD83A-201ENST00000386747 95 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 SNORA26.6-201ENST00000391256 115 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-602P-201ENST00000411155 105 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 HMGN2P34-201ENST00000437647 269 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 TMEM97P1-201ENST00000452969 451 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL74P-201ENST00000464966 299 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL250P-201ENST00000475154 258 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL209P-201ENST00000488309 276 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL504P-201ENST00000494496 287 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC106760.2-201ENST00000504159 619 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC112173.1-201ENST00000505876 327 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AL645949.1-201ENST00000510094 324 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-928P-201ENST00000516876 104 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 MIR3125-201ENST00000579927 78 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 CYCSP1-201ENST00000604815 315 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 MIR8053-201ENST00000613344 75 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 AC010266.2-201ENST00000564741 3255 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRTAP3-3Q9BYR6 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC006971.1-201ENST00000407916 4486 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 FAM205BP-202ENST00000399773 4009 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-1216P-201ENST00000362590 107 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 Y_RNA.98-201ENST00000363109 102 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-160P-201ENST00000384591 107 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AL009179.1-201ENST00000406085 265 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 OR2AT2P-201ENST00000413438 905 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC152007.1-201ENST00000428521 224 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC006455.3-201ENST00000454641 333 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU7-35P-201ENST00000517174 62 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 OR7E159P-201ENST00000553761 298 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 MRPS21P9-201ENST00000571150 257 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL457P-201ENST00000578760 287 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL378P-201ENST00000582657 298 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL52P-201ENST00000584271 284 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 FAM238B-204ENST00000612040 423 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 FTX_5.1-201ENST00000618701 218 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 SMCR2_1.1-201ENST00000621493 157 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 MIR6742-201ENST00000622338 62 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PKP4-218ENST00000629219 162 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC145138.1-201ENST00000512908 2851 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms