Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL25A1Q9BXS0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL25A1Q9BXS0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
COL25A1Q9BXS0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 AL136531.3-201ENST00000624378 3658 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.143-201ENST00000363520 106 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 RNU6-1130P-201ENST00000365434 107 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 SNORA9-201ENST00000384215 133 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 MTCYBP2-201ENST00000407745 171 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 RNA5SP111-201ENST00000411386 101 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 PDCD5P2-201ENST00000507570 312 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 RNU6-1219P-201ENST00000516143 112 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 RNU2-31P-201ENST00000516954 155 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 SYF2P1-201ENST00000550658 413 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 VN1R84P-201ENST00000593697 235 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 AL121917.1-203ENST00000605534 577 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 AL445567.2-201ENST00000618935 498 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 OR4G2P-202ENST00000641004 1759 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 HSPA8P4-201ENST00000511877 1920 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 AP000756.2-201ENST00000624168 2567 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 SAMMSON-226ENST00000642089 1582 ntBASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
COL25A1Q9BXS0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SNX18P3-202ENST00000565670 1750 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC007785.2-201ENST00000598627 1916 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RNU1-94P-201ENST00000362627 173 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SMIM11P1-201ENST00000369586 178 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SNORD116-18-201ENST00000383961 92 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.488-201ENST00000384403 102 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SNORA70C-201ENST00000384538 135 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.533-201ENST00000384596 114 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 MIR554-201ENST00000384874 96 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 MIR129-1-201ENST00000384972 72 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 MIR634-201ENST00000385208 97 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.602-201ENST00000410535 92 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RNU4-64P-201ENST00000410795 131 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RPS12P10-201ENST00000427031 377 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RPL34P20-201ENST00000442771 351 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SSXP4-201ENST00000451349 245 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 ISCUP1-201ENST00000454451 448 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AP001324.2-201ENST00000461163 319 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 PLGLA-201ENST00000465668 449 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 DUTP1-201ENST00000493631 470 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC007016.1-201ENST00000512110 244 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RNU6-496P-201ENST00000516145 99 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RN7SKP83-201ENST00000516512 178 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC112693.2-201ENST00000556538 232 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 RPL7P50-201ENST00000600588 727 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 AC130650.2-201ENST00000618736 2403 ntBASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms