Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC091152.2-201ENST00000591628 2569 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC138915.3-201ENST00000562908 1389 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AP000526.1-201ENST00000603308 1388 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RNA5SP197-201ENST00000363357 119 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RNU6-76P-201ENST00000384060 104 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RPS3AP26-201ENST00000398259 784 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MIR1305-201ENST00000408300 86 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC010099.3-201ENST00000423896 409 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC005300.1-201ENST00000428401 373 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 UBE2FP3-201ENST00000436366 524 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RSU1P2-202ENST00000437884 485 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC091862.1-201ENST00000438016 1100 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AL008629.1-201ENST00000438615 184 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 LSM1P1-201ENST00000438629 273 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 ISCA1P2-201ENST00000438679 421 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 THAP5P1-201ENST00000439089 262 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AL591503.2-201ENST00000442314 1005 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AP000542.1-201ENST00000448473 371 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RN7SL807P-201ENST00000470923 297 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC034222.1-201ENST00000494052 532 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC022447.3-201ENST00000506865 495 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC109464.2-201ENST00000510242 943 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC026801.2-201ENST00000515352 425 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 SNORA31.22-201ENST00000517204 135 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC087276.1-201ENST00000529659 480 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC055876.1-202ENST00000567053 138 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MTATP6P24-201ENST00000576835 677 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MIR4474-201ENST00000579189 78 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MIR5195-201ENST00000583555 115 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AL161756.2-201ENST00000604597 246 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AP000676.4-201ENST00000624659 623 ntBASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SDF4Q9BRK5 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC104454.1-201ENST00000421341 1401 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 RNA5SP383-201ENST00000362934 120 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 MTND1P21-201ENST00000412991 285 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC098592.1-201ENST00000419352 333 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 PPP1R11P2-201ENST00000423543 382 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 BX890604.2-201ENST00000427883 474 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 OR4K11P-201ENST00000431829 904 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 UBE2V1P13-201ENST00000436983 439 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 BX510359.1-201ENST00000456973 237 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 ARPC3P2-201ENST00000457786 533 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AL049830.2-201ENST00000480072 201 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC106872.3-201ENST00000495104 446 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 POU5F1P7-201ENST00000508759 541 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AP001804.3-201ENST00000525146 880 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC068587.4-201ENST00000533893 186 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC006539.2-201ENST00000601729 572 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC009268.2-201ENST00000621925 457 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 MIR4275-201ENST00000636486 87 ntBASIC3.8□□□□□ -1.8
SDF4Q9BRK5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.8□□□□□ -1.8
SDF4Q9BRK5 AC005832.2-201ENST00000538921 1430 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDF4Q9BRK5 RPL7P26-201ENST00000333817 754 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 SNORD56.3-201ENST00000363507 71 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 RNU6-805P-201ENST00000365643 106 ntBASIC3.79□□□□□ -1.8
SDF4Q9BRK5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms