Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 CYB5AP4-201ENST00000396692 399 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL121834.1-202ENST00000404494 277 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 COX6B1P1-201ENST00000415962 213 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 RPL7P10-201ENST00000417407 739 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL139095.3-201ENST00000419672 1203 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 TXNP1-201ENST00000441872 371 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL162388.1-201ENST00000450912 352 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 FABP5P13-201ENST00000452144 328 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AP000942.1-201ENST00000463969 747 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 DYNLL1P5-201ENST00000467158 270 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC010631.1-201ENST00000474150 156 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC079140.5-201ENST00000507882 310 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC008526.1-201ENST00000509149 338 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 RNU6-123P-201ENST00000516163 102 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 RPL23AP84-201ENST00000571193 464 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL138889.2-201ENST00000603883 242 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC024940.4-201ENST00000605507 246 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL138726.1-201ENST00000614873 333 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AP001642.1-201ENST00000624727 2117 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AC100778.3-201ENST00000580060 1750 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 AL137003.2-201ENST00000606924 2538 ntBASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD1Q96NR3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 MTND4P1-201ENST00000457501 1466 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 SNORA73.1-201ENST00000363107 205 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RNU6-1309P-201ENST00000363305 108 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 Y_RNA.135-201ENST00000363439 95 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RNU6-701P-201ENST00000384059 107 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RNU6-310P-201ENST00000384655 107 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 SNORD70.1-201ENST00000391007 85 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC013442.1-201ENST00000397347 228 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 HMGB3P21-201ENST00000452483 547 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RNA5SP103-201ENST00000459503 118 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 TRBV1-201ENST00000476502 284 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC002456.2-201ENST00000509356 380 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC026801.2-201ENST00000515352 425 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC021006.3-201ENST00000530771 192 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC007938.3-201ENST00000604965 623 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL034351.1-201ENST00000605288 668 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 ATP1B3P1-201ENST00000605365 821 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC009570.1-201ENST00000609599 745 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 U2.17-201ENST00000611454 95 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL355365.1-201ENST00000616480 294 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC098657.3-201ENST00000620434 263 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 AL359922.3-201ENST00000624779 1670 ntBASIC4.64□□□□□ -1.67
PTCHD1Q96NR3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms