Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AL356010.1-201ENST00000456364 102 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 GMFBP1-201ENST00000467831 427 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 RPS26P28-201ENST00000470806 348 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 UQCRHP4-201ENST00000471686 272 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC010631.1-201ENST00000474150 156 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC106872.2-201ENST00000494303 480 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 RN7SL691P-201ENST00000494487 301 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 STMN1P2-201ENST00000508435 439 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 PARP4P3-201ENST00000510265 317 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC114797.1-201ENST00000514003 728 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 RNA5SP315-201ENST00000516340 116 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 SCARNA15.2-201ENST00000516409 127 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 RNA5SP312-201ENST00000517068 116 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 RN7SKP258-201ENST00000517151 304 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 HMGB1P33-201ENST00000563485 527 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 AP001029.3-201ENST00000588063 596 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC090517.2-201ENST00000614966 680 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 AP001486.3-201ENST00000615334 372 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 AL136313.1-201ENST00000624804 202 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF428Q96B54 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF428Q96B54 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.55□□□□□ -1.52
ZNF428Q96B54 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ZNF428Q96B54 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF428Q96B54 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNF428Q96B54 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF428Q96B54 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 RNU6-600P-201ENST00000362524 99 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 RNU1-108P-201ENST00000362556 161 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 Y_RNA.372-201ENST00000365599 102 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 RNU2-37P-201ENST00000410695 177 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AL513331.1-201ENST00000411908 397 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC018630.2-202ENST00000422992 927 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 UBE2V1P8-201ENST00000437166 265 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AL451074.3-201ENST00000437709 472 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC020550.1-201ENST00000447385 163 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 FGF7P6-202ENST00000451282 293 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC013267.1-201ENST00000458227 267 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 NIPA2P2-201ENST00000496376 1083 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 RPS27AP13-201ENST00000498403 237 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 RNA5SP519-201ENST00000516480 119 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 RNU6-352P-201ENST00000516908 107 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC106785.1-201ENST00000565935 262 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC055876.1-202ENST00000567053 138 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC126118.1-201ENST00000607744 628 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 AC007998.5-201ENST00000622938 237 ntBASIC5.54□□□□□ -1.52
ZNF428Q96B54 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF428Q96B54 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZNF428Q96B54 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.54□□□□□ -1.52
ZNF428Q96B54 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC008568.2-201ENST00000623862 2313 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF428Q96B54 MIR383-201ENST00000362257 73 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 RNA5SP366-201ENST00000365454 123 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF428Q96B54 SNORA70C-201ENST00000384538 135 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 RPS4XP8-201ENST00000402039 771 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 AL603766.1-201ENST00000407763 664 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC019235.1-201ENST00000503847 207 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC105417.1-201ENST00000514691 285 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 AC048347.1-201ENST00000624621 427 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 MIR3653-201ENST00000625572 110 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 RNA5SP196-201ENST00000625967 102 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 LRRC77P-213ENST00000637727 880 ntBASIC5.53□□□□□ -1.52
ZNF428Q96B54 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF428Q96B54 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF428Q96B54 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZNF428Q96B54 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.53□□□□□ -1.52
ZNF428Q96B54 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms