Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC009237.8-201ENST00000445492 379 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 MRPL42P4-201ENST00000453267 443 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 SEM1P1-201ENST00000506694 209 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC117522.3-201ENST00000507974 584 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 RNU6-467P-201ENST00000517027 110 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC104986.1-201ENST00000517978 436 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF139Q8WU17 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF139Q8WU17 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AL136520.1-202ENST00000555494 763 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC090330.1-201ENST00000588646 764 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AL022067.1-201ENST00000602426 454 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AL136363.1-201ENST00000605349 337 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 RPL21P136-201ENST00000605378 396 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC078880.5-201ENST00000617845 421 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AL355493.4-201ENST00000618530 292 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC004009.2-201ENST00000623016 728 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC022336.2-201ENST00000568966 2538 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.94□□□□□ -1.94
RNF139Q8WU17 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF139Q8WU17 AC005832.2-201ENST00000538921 1430 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF139Q8WU17 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 RPL9P7-201ENST00000330965 580 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 RNU6-207P-201ENST00000384137 107 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 RPL19P1-201ENST00000411635 428 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 UBE2D3P3-201ENST00000426992 425 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 AP001486.1-201ENST00000463339 476 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 MTND4LP3-201ENST00000468320 276 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AP001025.2-201ENST00000490908 477 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC026414.1-201ENST00000504046 698 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 RNU6-1282P-201ENST00000516735 96 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 COX6CP8-201ENST00000522620 226 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 CYCSP39-201ENST00000565821 309 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 LARP7P2-201ENST00000575306 125 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC006504.3-201ENST00000586818 523 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AF131215.7-201ENST00000602443 707 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AL627309.6-201ENST00000606857 840 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC090772.4-201ENST00000623599 362 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC010872.1-201ENST00000624225 675 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF139Q8WU17 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF139Q8WU17 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 SDAD1P2-201ENST00000441308 2028 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF139Q8WU17 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
RNF139Q8WU17 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF139Q8WU17 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF139Q8WU17 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RNF139Q8WU17 OR5J1P-201ENST00000313544 939 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 SNORA5B-201ENST00000363786 132 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 MIR634-201ENST00000385208 97 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AL122016.1-201ENST00000403365 367 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 NDUFB4P7-201ENST00000423198 363 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 TAAR7P-201ENST00000436141 242 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC105272.1-201ENST00000438604 198 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF139Q8WU17 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF139Q8WU17 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC087588.1-201ENST00000462203 316 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC109464.2-201ENST00000510242 943 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 OR5BM1P-201ENST00000512021 366 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC125611.1-201ENST00000549563 229 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 GTF3AP2-201ENST00000557014 266 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC090695.1-201ENST00000561269 1222 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC138761.3-201ENST00000579993 334 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 ZNF861P-201ENST00000588126 639 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AL157770.1-201ENST00000623049 439 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC073308.1-201ENST00000623696 305 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 AC087821.2-201ENST00000637086 450 ntBASIC2.92□□□□□ -1.94
RNF139Q8WU17 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
RNF139Q8WU17 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RNF139Q8WU17 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNF139Q8WU17 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF139Q8WU17 Y_RNA.25-201ENST00000362528 102 ntBASIC2.91□□□□□ -1.94
RNF139Q8WU17 RNU5A-1-201ENST00000362698 116 ntBASIC2.91□□□□□ -1.94
RNF139Q8WU17 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RNF139Q8WU17 RNU6-1035P-201ENST00000384477 107 ntBASIC2.91□□□□□ -1.94
RNF139Q8WU17 SNORA40.4-201ENST00000390971 128 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms