Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 TAF9BP2-201ENST00000400856 499 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AL589655.1-201ENST00000405398 482 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 MTATP6P11-201ENST00000428071 670 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC128713.1-201ENST00000471495 306 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 RNA5SP24-201ENST00000516478 95 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 RPL7P20-201ENST00000520308 745 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC087272.1-201ENST00000523624 533 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC103810.6-201ENST00000606708 136 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC106028.5-201ENST00000610332 395 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 MIR6715A-201ENST00000615929 79 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 STMN1P1-201ENST00000617809 440 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 AC083865.1-201ENST00000636634 831 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC112Q8NEF3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 RNU4-52P-201ENST00000384209 138 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 RNU6-821P-201ENST00000390995 107 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC092745.2-202ENST00000411880 369 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 HMGB3P31-201ENST00000413333 595 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 MORF4L1P7-201ENST00000426038 703 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC010881.1-201ENST00000433830 235 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 RPS15AP28-201ENST00000435088 386 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AL513124.1-201ENST00000450410 614 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 RNU6-717P-201ENST00000459076 104 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 OR9N1P-202ENST00000494289 481 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 UBTFL10-201ENST00000528532 562 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC106734.1-201ENST00000568646 663 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 FAM60BP-201ENST00000578364 658 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 MIR5007-201ENST00000583098 95 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AL355802.4-201ENST00000607635 548 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC090617.9-201ENST00000623751 147 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 AC064859.1-201ENST00000624741 174 ntBASIC2.49□□□□□ -2.01
CCDC112Q8NEF3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 RNU5D-1-201ENST00000363299 116 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 SNORA51.12-201ENST00000384448 134 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 RN7SKP140-201ENST00000411196 284 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 RPS15AP38-201ENST00000413110 372 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC096632.1-201ENST00000427395 310 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 MYL8P-204ENST00000431574 518 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 FABP5P3-201ENST00000437960 408 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC009296.1-201ENST00000443146 155 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC015724.1-201ENST00000478577 156 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC087808.1-201ENST00000520501 361 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 SUB1P1-201ENST00000524415 382 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 MED28P6-201ENST00000558776 231 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC027104.1-201ENST00000563702 681 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC245517.5-201ENST00000611529 162 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AC024595.1-201ENST00000623088 387 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 AL109659.3-201ENST00000624985 950 ntBASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC112Q8NEF3 ENSAP3-201ENST00000312710 333 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 RNA5SP138-201ENST00000365098 114 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 RNA5SP338-201ENST00000410495 85 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 RNU6-272P-201ENST00000411028 104 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 RN7SKP192-201ENST00000411291 327 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 ZNF965P-201ENST00000432501 817 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC025755.1-201ENST00000521306 278 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AL512310.1-201ENST00000548639 172 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 SNORD53-201ENST00000579969 78 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC022069.1-201ENST00000582910 658 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AC012669.1-201ENST00000603209 283 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 AL353748.2-201ENST00000622148 471 ntBASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC112Q8NEF3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms