Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC119751.7-201ENST00000600494 245 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 BNIP3P11-201ENST00000603878 563 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC009509.4-201ENST00000619202 509 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC009878.1-201ENST00000621819 340 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC092656.1-203ENST00000624134 423 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 MTND5P1-201ENST00000445440 1375 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 AC058791.1-201ENST00000608412 3198 ntBASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
C11orf42Q8N5U0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 PABPC1P9-201ENST00000426076 1612 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 MTCO1P23-201ENST00000415223 1526 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AP002907.1-201ENST00000606361 1430 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RNU6-501P-201ENST00000364072 100 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 Y_RNA.505-201ENST00000384489 102 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL121972.1-201ENST00000402023 252 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RNA5SP107-201ENST00000411358 122 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RPL7P30-201ENST00000420888 709 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC097713.2-201ENST00000430199 356 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 DLGAP5P1-201ENST00000430307 464 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL365184.2-201ENST00000431139 435 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 HSPE1P28-201ENST00000443139 211 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 PRDX3P3-201ENST00000447765 522 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RPL21P13-201ENST00000488305 481 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 CBX3P3-201ENST00000508108 532 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RNU6-150P-201ENST00000516237 95 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 SNORA70.19-201ENST00000516717 90 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AP000873.5-201ENST00000533906 236 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC012213.3-201ENST00000577199 777 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC011468.4-201ENST00000603942 409 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC113194.1-201ENST00000606037 500 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC107214.2-201ENST00000608204 634 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC025588.4-201ENST00000615802 908 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AL355365.1-201ENST00000616480 294 ntBASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.8□□□□□ -1.96
C11orf42Q8N5U0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 RNU1-33P-201ENST00000364249 162 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AC016769.3-201ENST00000396562 315 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 DHFRP6-201ENST00000401776 268 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 SSXP10-201ENST00000402595 565 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AL583834.1-201ENST00000406943 343 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 RN7SKP123-201ENST00000410732 291 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 RPL31P2-201ENST00000413849 377 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 TPMTP2-201ENST00000414372 726 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AC245291.1-201ENST00000419501 328 ntBASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.79□□□□□ -1.96
C11orf42Q8N5U0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms