Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DDX18P3-201ENST00000404856 2007 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 U3.12-201ENST00000364498 214 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 Y_RNA.339-201ENST00000365325 102 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 RNU4-20P-201ENST00000365601 151 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 MIR141-201ENST00000384975 95 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL359634.1-202ENST00000404721 284 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL023807.1-201ENST00000407932 359 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC016397.1-201ENST00000412463 242 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL161631.1-201ENST00000417933 486 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 BEND7P1-201ENST00000422058 457 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC018630.2-202ENST00000422992 927 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 RPS12P5-201ENST00000423449 371 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL132765.1-201ENST00000434165 553 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL356276.2-201ENST00000435919 558 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC005297.2-201ENST00000450430 606 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 PPP1R2P5-201ENST00000457256 603 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 RNU7-152P-201ENST00000458982 64 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 RN7SL481P-201ENST00000477764 299 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC055855.1-201ENST00000489563 579 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC021146.2-201ENST00000504736 556 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 FAM206BP-201ENST00000510179 541 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 RPS27AP18-201ENST00000515536 459 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 RNA5SP73-201ENST00000516744 108 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 LSM6P2-201ENST00000552208 177 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC105224.1-201ENST00000587055 421 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL713922.2-201ENST00000619384 716 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL023881.1-201ENST00000621088 301 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 CR392039.4-201ENST00000624968 501 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC097714.1-201ENST00000511272 1647 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VRK3Q8IV63 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AL133243.3-201ENST00000617415 3004 ntBASIC4.16□□□□□ -1.74
VRK3Q8IV63 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VRK3Q8IV63 AC091046.3-201ENST00000631455 1574 ntBASIC4.15□□□□□ -1.74
VRK3Q8IV63 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VRK3Q8IV63 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VRK3Q8IV63 RN7SKP44-201ENST00000363602 316 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 RNA5SP366-201ENST00000365454 123 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 Y_RNA.459-201ENST00000384251 102 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 RNU6-1297P-201ENST00000384415 104 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 RNU6-1105P-201ENST00000384774 107 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 RPL23AP26-201ENST00000412728 464 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC245054.2-201ENST00000415639 319 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 RPS23P10-201ENST00000416185 486 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 RPS15AP12-201ENST00000419498 388 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC108059.2-201ENST00000434626 151 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 RPS3AP52-201ENST00000435639 297 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 TRBV26-201ENST00000456572 344 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 MTCO1P29-201ENST00000496868 288 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC091885.1-201ENST00000506658 268 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VRK3Q8IV63 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 MIR4284-201ENST00000578924 81 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.15□□□□□ -1.75
VRK3Q8IV63 RPL23AP92-201ENST00000603609 255 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 DPPA3P3-201ENST00000603842 430 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AL627309.6-201ENST00000606857 840 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 MIR378J-201ENST00000611988 109 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC130324.3-201ENST00000614165 542 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 SNX18P1Y-201ENST00000616231 511 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 MIR7154-201ENST00000620673 73 ntBASIC4.15□□□□□ -1.75
VRK3Q8IV63 AC015908.5-201ENST00000623289 343 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms