Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.42□□□□□ -1.54
USP48Q86UV5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.42□□□□□ -1.54
USP48Q86UV5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
USP48Q86UV5 AC139713.2-215ENST00000641428 5037 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 Z73965.1-201ENST00000623412 2297 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 NACAP2-201ENST00000318548 624 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 Y_RNA.529-201ENST00000384586 119 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 MIR454-201ENST00000390180 115 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP48Q86UV5 RNU6-837P-201ENST00000391056 108 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AL109755.1-201ENST00000401791 649 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 RN7SKP167-201ENST00000411047 285 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 RNA5SP107-201ENST00000411358 122 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AL137014.1-201ENST00000420490 1226 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 BEND7P1-201ENST00000422058 457 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC008850.1-201ENST00000427546 362 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AL117339.2-201ENST00000430475 180 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC007967.1-201ENST00000455422 1159 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 AL163973.1-201ENST00000484753 577 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC010486.1-201ENST00000511793 424 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC105417.1-201ENST00000514691 285 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 HMGB1P41-201ENST00000520234 440 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 DEFB108D-201ENST00000527787 222 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC011712.1-201ENST00000588959 234 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC078795.3-201ENST00000602913 472 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC010591.1-201ENST00000603941 649 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC233309.1-201ENST00000619522 751 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 MIR6075-201ENST00000620782 95 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC112484.5-201ENST00000624189 228 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.41□□□□□ -1.54
USP48Q86UV5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
USP48Q86UV5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP48Q86UV5 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.41□□□□□ -1.54
USP48Q86UV5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.41□□□□□ -1.54
USP48Q86UV5 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.4□□□□□ -1.54
USP48Q86UV5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.4□□□□□ -1.54
USP48Q86UV5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP48Q86UV5 OR5P1P-201ENST00000299512 925 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RPL7P26-201ENST00000333817 754 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RNU4-73P-201ENST00000363164 141 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RNA5SP151-201ENST00000365632 117 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.4□□□□□ -1.54
USP48Q86UV5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
USP48Q86UV5 RNU6-641P-201ENST00000384006 107 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AL136372.1-201ENST00000403060 228 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AL136116.1-201ENST00000403591 381 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RNU2-39P-201ENST00000410604 198 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RNA5SP146-201ENST00000410743 123 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 VDAC1P9-201ENST00000412766 841 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.4□□□□□ -1.54
USP48Q86UV5 AC005094.1-201ENST00000440420 368 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AC093019.1-201ENST00000443135 252 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.4□□□□□ -1.54
USP48Q86UV5 GMFBP1-201ENST00000467831 427 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AC126389.1-201ENST00000477436 290 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 RPL7P23-201ENST00000493874 747 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 MTCO3P9-201ENST00000506989 781 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.4□□□□□ -1.54
USP48Q86UV5 Y_RNA.701-201ENST00000516812 110 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 FAM60DP-201ENST00000524174 632 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 TRAV8-5-201ENST00000537369 341 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
USP48Q86UV5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.4□□□□□ -1.54
USP48Q86UV5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.4□□□□□ -1.54
USP48Q86UV5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.4□□□□□ -1.54
USP48Q86UV5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.4□□□□□ -1.54
USP48Q86UV5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.4□□□□□ -1.54
USP48Q86UV5 AC018638.8-201ENST00000588755 281 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AC010680.4-201ENST00000605334 543 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 AC020634.1-201ENST00000608701 549 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 FRG1KP-201ENST00000623592 341 ntBASIC5.4□□□□□ -1.54
USP48Q86UV5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
USP48Q86UV5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP48Q86UV5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
USP48Q86UV5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
USP48Q86UV5 AC244517.1-201ENST00000606030 2086 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 RIOK3P1-201ENST00000418778 1528 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
USP48Q86UV5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
USP48Q86UV5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.39□□□□□ -1.55
USP48Q86UV5 RNU4-65P-201ENST00000410473 140 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 SDCBPP3-201ENST00000419629 891 ntBASIC5.39□□□□□ -1.55
USP48Q86UV5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms