Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC113139.1-201ENST00000605049 239 ntBASIC5.1□□□□□ -1.59
RUFY4Q6ZNE9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.1□□□□□ -1.59
RUFY4Q6ZNE9 RMST_7.1-201ENST00000621935 268 ntBASIC5.1□□□□□ -1.59
RUFY4Q6ZNE9 U6.114-201ENST00000636407 96 ntBASIC5.1□□□□□ -1.59
RUFY4Q6ZNE9 AL137003.2-201ENST00000606924 2538 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC025031.4-201ENST00000621248 3271 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 TAB3P1-202ENST00000452645 1634 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MTND4P14-201ENST00000435799 1354 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-1227P-201ENST00000383981 107 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-38P-201ENST00000384085 107 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AL606923.1-201ENST00000406616 190 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MIR1193-201ENST00000408109 78 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 U3.35-201ENST00000408405 208 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 NUTF2P7-201ENST00000453086 375 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC234775.1-201ENST00000454247 670 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RPL23AP24-201ENST00000458203 385 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-333P-201ENST00000459117 107 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC010618.1-201ENST00000469924 477 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC109327.1-201ENST00000471666 403 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RPL21P99-201ENST00000480369 423 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC112206.3-201ENST00000514578 389 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-277P-201ENST00000516272 106 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-1092P-201ENST00000516955 87 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 DEFB109D-201ENST00000529497 240 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AL355375.2-201ENST00000574825 175 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MIR4742-201ENST00000581069 85 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MIR4424-201ENST00000585257 86 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC021646.1-201ENST00000605469 484 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC012443.1-201ENST00000605605 231 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC090948.1-201ENST00000607464 549 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AP005019.3-201ENST00000620418 560 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC140113.4-201ENST00000622087 222 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC005858.4-201ENST00000623191 700 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 MIR1302-1-201ENST00000637932 143 ntBASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.09□□□□□ -1.59
RUFY4Q6ZNE9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 DDX10P1-201ENST00000448545 1933 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 SNORA63-201ENST00000363450 132 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNU4-20P-201ENST00000365601 151 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-1029P-201ENST00000384109 107 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 Z98745.1-201ENST00000402553 494 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNU2-36P-201ENST00000410361 191 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNA5SP146-201ENST00000410743 123 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNU6-1148P-201ENST00000410992 104 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RPS7P15-201ENST00000415804 584 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AL391219.1-201ENST00000422570 483 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC004975.1-201ENST00000428733 208 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RPL23AP93-201ENST00000440847 484 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AL590399.6-201ENST00000446396 307 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC073587.1-201ENST00000447093 876 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC025164.1-201ENST00000496249 478 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC092436.1-201ENST00000506450 503 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 RNU4-49P-201ENST00000516080 140 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC107918.3-201ENST00000533272 382 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC093027.1-201ENST00000546698 429 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 MIR3939-201ENST00000582614 106 ntBASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RUFY4Q6ZNE9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 GABPAP-201ENST00000419271 1356 ntBASIC5.07□□□□□ -1.6
RUFY4Q6ZNE9 AL136164.3-201ENST00000624429 3978 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 331.3 ms