Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.66□□□□□ -1.5
USPL1Q5W0Q7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AL451142.2-201ENST00000429076 2090 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 ZNF734P-201ENST00000419494 1534 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 MTCO1P9-201ENST00000505577 1534 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.132-201ENST00000363421 102 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.216-201ENST00000364205 93 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 SNORA33.2-201ENST00000365413 134 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 UBBP2-201ENST00000376781 231 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RNU6-474P-201ENST00000384243 107 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RNU6-387P-201ENST00000411331 105 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 VN1R36P-201ENST00000414936 291 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RPS15AP40-201ENST00000419621 391 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RPL23AP52-201ENST00000439311 478 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RPS17P13-201ENST00000448974 407 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC107399.1-201ENST00000451226 265 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AL591473.1-201ENST00000464297 313 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 MTND4P17-201ENST00000470444 350 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC027575.1-201ENST00000481064 460 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 TRBVA-201ENST00000498804 316 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 RNU6-798P-201ENST00000516912 103 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 Y_RNA.711-201ENST00000516993 102 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AL080274.1-201ENST00000605565 220 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC006133.1-201ENST00000617106 264 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 MIR6891-201ENST00000618788 93 ntBASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.65□□□□□ -1.5
USPL1Q5W0Q7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
USPL1Q5W0Q7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 BDP1P-201ENST00000582658 1990 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RN7SKP44-201ENST00000363602 316 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.339-201ENST00000365325 102 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.395-201ENST00000383945 109 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RNU6-146P-201ENST00000384602 108 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RNY4P36-201ENST00000391116 96 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MTCYBP4-201ENST00000401524 249 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RPL12P18-201ENST00000437175 325 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AL118520.1-201ENST00000450770 291 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 EIF4A1P11-201ENST00000451239 222 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RNU7-66P-201ENST00000459469 62 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RN7SL542P-201ENST00000467147 294 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 VN1R17P-201ENST00000472048 1090 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 RN7SKP82-201ENST00000516786 223 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 HMGN1P28-201ENST00000521340 364 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 FAM60DP-201ENST00000524174 632 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AL137161.1-201ENST00000532231 390 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AP000889.2-201ENST00000532684 490 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 SETP7-201ENST00000552169 453 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MIR4472-2-201ENST00000582069 67 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MIR3158-1-201ENST00000583596 81 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AC080078.3-201ENST00000605407 463 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 AC084781.2-201ENST00000615568 161 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MIR8059-201ENST00000620427 81 ntBASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
USPL1Q5W0Q7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 SAGE2P-201ENST00000420011 2126 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 SNORD113-7-201ENST00000363762 77 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 RNU5E-6P-201ENST00000365574 115 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 SNORD116-29-201ENST00000384516 83 ntBASIC5.63□□□□□ -1.51
USPL1Q5W0Q7 ENSAP1-201ENST00000392855 326 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms