Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL359212.1-201ENST00000556608 614 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 MIR4512-201ENST00000583257 77 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC008752.3-201ENST00000588113 712 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL592436.1-201ENST00000605135 558 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC025253.1-201ENST00000613623 543 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC012150.2-201ENST00000621300 544 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 MIR6500-201ENST00000622700 86 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AL159972.1-201ENST00000625150 448 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 AC011978.2-201ENST00000569835 2054 ntBASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC178Q5BJE1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RNU6-797P-201ENST00000363101 109 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 Y_RNA.159-201ENST00000363674 87 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 FGF7P8-201ENST00000402994 292 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RNU2-9P-201ENST00000410194 145 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 MTND3P23-201ENST00000431980 347 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 USP12PX-201ENST00000432383 1057 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 MTCO3P18-201ENST00000440206 761 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 BNIP3P2-201ENST00000441221 577 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RPS20P24-201ENST00000457473 361 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC055855.1-201ENST00000489563 579 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC025554.1-201ENST00000505641 188 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RNU6-358P-201ENST00000516564 75 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RNA5SP179-201ENST00000517284 121 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AP001646.1-201ENST00000527936 915 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 YPEL5P3-201ENST00000547227 352 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 ADI1P3-201ENST00000549509 470 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC120057.2-201ENST00000571520 271 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC004853.1-201ENST00000604902 698 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC091167.4-201ENST00000605079 184 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC093788.1-201ENST00000609356 927 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AL590099.1-201ENST00000615276 138 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AC104985.2-201ENST00000620598 500 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AL773545.4-201ENST00000637262 310 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 AL513478.4-201ENST00000641636 310 ntBASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC178Q5BJE1 MTND4P12-201ENST00000498999 1377 ntBASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 MAPK10-373ENST00000641983 6772 ntBASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 AC011460.1-201ENST00000636268 1834 ntBASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 NMD3P1-201ENST00000439704 1488 ntBASIC4.65□□□□□ -1.66
CCDC178Q5BJE1 Y_RNA.160-201ENST00000363677 92 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RNA5SP399-201ENST00000364003 117 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RNU6-694P-201ENST00000364071 147 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RNA5SP97-201ENST00000365006 84 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RNU6-213P-201ENST00000384051 104 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 Y_RNA.548-201ENST00000384656 105 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 MIR93-201ENST00000385024 80 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 MTND4LP20-201ENST00000402379 270 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 MIR1183-201ENST00000408856 89 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RNA5SP39-201ENST00000411245 120 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 AC008065.1-201ENST00000428525 348 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RPL23AP30-201ENST00000432419 501 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 AC083863.1-201ENST00000438811 231 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 AC108734.1-201ENST00000439549 399 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 HMGB1P37-201ENST00000439613 609 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 MTND4P25-201ENST00000441039 533 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RPL37P6-202ENST00000464216 403 ntBASIC4.65□□□□□ -1.67
CCDC178Q5BJE1 RPL23AP41-201ENST00000484754 458 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms