Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 MTCO1P19-201ENST00000443487 500 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 RPL23AP62-201ENST00000463396 453 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AL672167.3-201ENST00000465951 960 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 RNU1-61P-201ENST00000516107 151 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 SNORA70.16-201ENST00000516390 95 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC107934.1-201ENST00000522215 217 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AP003181.2-201ENST00000528941 181 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC055876.1-202ENST00000567053 138 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 MIR3186-201ENST00000577404 85 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 HMGN1P30-201ENST00000589286 268 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC064872.1-201ENST00000604823 1072 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC131902.3-201ENST00000611767 581 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC008250.2-201ENST00000615261 205 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC092628.2-201ENST00000622492 339 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC091953.2-201ENST00000623979 160 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 TEX21P-201ENST00000447107 1476 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AC092104.1-201ENST00000497346 1441 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC38Q502W7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC38Q502W7 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 MIR1290-201ENST00000408735 78 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 RN7SKP159-201ENST00000410657 292 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 RNU4-6P-201ENST00000410804 122 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 RNU2-62P-201ENST00000410868 191 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 MTCO2P34-201ENST00000421994 607 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 TXNP1-201ENST00000441872 371 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 MTCO3P45-201ENST00000443036 613 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 MTND6P13-201ENST00000443510 523 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AL049830.2-201ENST00000480072 201 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 MTCO3P28-201ENST00000513351 515 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 RNU6-840P-201ENST00000517275 65 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC024909.2-201ENST00000553035 286 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC025884.1-201ENST00000556034 378 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 OR4H12P-201ENST00000556269 907 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AP005205.1-201ENST00000563503 508 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC006362.1-201ENST00000567392 174 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AF038458.1-201ENST00000588406 262 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 SEPT7P9-203ENST00000604116 343 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AC106900.2-201ENST00000604994 317 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AP001506.1-201ENST00000615444 211 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 uc_338.12-201ENST00000616344 181 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 AL139089.1-201ENST00000620372 975 ntBASIC4.01□□□□□ -1.77
CCDC38Q502W7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC38Q502W7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC38Q502W7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC38Q502W7 AF127577.6-201ENST00000623352 2191 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 AC110754.1-201ENST00000399740 601 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 HLFP1-201ENST00000402375 499 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 TXNP7-201ENST00000406296 293 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms