Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-898P-201ENST00000365627 104 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-102P-201ENST00000384485 104 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 MIR186-201ENST00000384988 86 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-651P-201ENST00000411040 105 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNA5SP111-201ENST00000411386 101 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC009220.1-201ENST00000451614 275 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC016925.1-201ENST00000458303 298 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AP001324.2-201ENST00000461163 319 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC006511.1-201ENST00000470614 315 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RN7SL447P-201ENST00000494711 245 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC093853.1-201ENST00000515689 483 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-1333P-201ENST00000516162 93 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-426P-201ENST00000516464 97 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 MIR2117-201ENST00000516780 80 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-798P-201ENST00000516912 103 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RNU6-64P-201ENST00000517119 105 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 MIR4480-201ENST00000582492 71 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC006115.2-201ENST00000596823 202 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 AC090607.5-201ENST00000615692 224 ntBASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.94□□□□□ -1.46
CTC1Q2NKJ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.27-201ENST00000362540 103 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 MIR141-201ENST00000384975 95 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 MIR92A2-201ENST00000385299 75 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AL139039.1-201ENST00000401900 692 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 RNU6-257P-201ENST00000410238 98 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC007098.1-201ENST00000420122 367 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 RPL30P10-201ENST00000488148 337 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 RPL30P1-201ENST00000488676 339 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC005798.1-201ENST00000513715 387 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC010186.2-204ENST00000537668 439 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC063949.1-201ENST00000552900 865 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 RPL23AP92-201ENST00000603609 255 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AC097063.1-201ENST00000426714 1797 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 AL034546.1-201ENST00000623740 3693 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.93□□□□□ -1.46
CTC1Q2NKJ3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 SNORD113-8-201ENST00000363497 74 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 RNU6-960P-201ENST00000364056 120 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 RNU6-1329P-201ENST00000365664 107 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.400-201ENST00000383963 111 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 Y_RNA.533-201ENST00000384596 114 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 RNU5E-9P-201ENST00000411164 104 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AL049745.1-201ENST00000433953 286 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 RPS4XP20-201ENST00000505751 772 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AC074250.1-201ENST00000511117 192 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 ACA59.1-201ENST00000515966 143 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 RNU4-57P-201ENST00000515980 135 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 SYF2P1-201ENST00000550658 413 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AL158827.2-201ENST00000602494 330 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 FAM25E-202ENST00000608562 189 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 CYP3A51P-201ENST00000633513 256 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AL691447.3-201ENST00000635020 330 ntBASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CTC1Q2NKJ3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.91□□□□□ -1.46
CTC1Q2NKJ3 AC097461.1-201ENST00000568928 2821 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms