Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 AP005205.1-201ENST00000563503 508 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 AC090616.5-202ENST00000582111 297 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.82□□□□□ -1.8
RAE1P78406 AC098848.2-201ENST00000588023 330 ntBASIC3.82□□□□□ -1.8
RAE1P78406 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.82□□□□□ -1.8
RAE1P78406 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.82□□□□□ -1.8
RAE1P78406 AC025449.1-201ENST00000603896 529 ntBASIC3.82□□□□□ -1.8
RAE1P78406 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 HMGN2P28-201ENST00000606102 262 ntBASIC3.82□□□□□ -1.8
RAE1P78406 AP001596.2-201ENST00000608410 312 ntBASIC3.82□□□□□ -1.8
RAE1P78406 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
RAE1P78406 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 AC244100.1-202ENST00000621554 382 ntBASIC3.82□□□□□ -1.8
RAE1P78406 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.82□□□□□ -1.8
RAE1P78406 OR52H1-202ENST00000641796 1061 ntBASIC3.82□□□□□ -1.8
RAE1P78406 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.82□□□□□ -1.8
RAE1P78406 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAE1P78406 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.82□□□□□ -1.8
RAE1P78406 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.81□□□□□ -1.8
RAE1P78406 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 RNU5E-8P-201ENST00000363502 116 ntBASIC3.81□□□□□ -1.8
RAE1P78406 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 RNU6-39P-201ENST00000384344 107 ntBASIC3.81□□□□□ -1.8
RAE1P78406 MIR558-201ENST00000384920 94 ntBASIC3.81□□□□□ -1.8
RAE1P78406 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.81□□□□□ -1.8
RAE1P78406 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.81□□□□□ -1.8
RAE1P78406 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 RPL7P54-201ENST00000438336 674 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
RAE1P78406 FDX1P2-201ENST00000450769 375 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.81□□□□□ -1.8
RAE1P78406 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.81□□□□□ -1.8
RAE1P78406 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 RNU2-10P-201ENST00000516375 211 ntBASIC3.81□□□□□ -1.8
RAE1P78406 RNU6-64P-201ENST00000517119 105 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 MTND1P35-201ENST00000526739 508 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 RPL21P12-201ENST00000559810 515 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.81□□□□□ -1.8
RAE1P78406 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.81□□□□□ -1.8
RAE1P78406 HMGB1P6-201ENST00000569046 646 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AL162413.1-201ENST00000603198 110 ntBASIC3.81□□□□□ -1.8
RAE1P78406 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 AC022306.2-201ENST00000617563 647 ntBASIC3.81□□□□□ -1.8
RAE1P78406 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.81□□□□□ -1.8
RAE1P78406 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
RAE1P78406 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.81□□□□□ -1.8
RAE1P78406 AC019226.1-201ENST00000625666 515 ntBASIC3.81□□□□□ -1.8
RAE1P78406 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.81□□□□□ -1.8
RAE1P78406 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAE1P78406 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.8□□□□□ -1.8
RAE1P78406 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 RNA5SP399-201ENST00000364003 117 ntBASIC3.8□□□□□ -1.8
RAE1P78406 Y_RNA.295-201ENST00000364918 102 ntBASIC3.8□□□□□ -1.8
RAE1P78406 RNU6-74P-201ENST00000384235 107 ntBASIC3.8□□□□□ -1.8
RAE1P78406 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAE1P78406 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC016397.1-201ENST00000412463 242 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AMD1P2-201ENST00000412936 992 ntBASIC3.8□□□□□ -1.8
RAE1P78406 MRPL50P2-201ENST00000416821 482 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 MED13P1-201ENST00000428342 171 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.8□□□□□ -1.8
RAE1P78406 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
RAE1P78406 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.8□□□□□ -1.8
RAE1P78406 TBCAP1-201ENST00000436520 327 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
RAE1P78406 RPS15AP9-201ENST00000439856 381 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 RPS23P1-201ENST00000491662 432 ntBASIC3.8□□□□□ -1.8
RAE1P78406 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.8□□□□□ -1.8
RAE1P78406 AC114797.1-201ENST00000514003 728 ntBASIC3.8□□□□□ -1.8
RAE1P78406 SNORD27.1-201ENST00000516319 72 ntBASIC3.8□□□□□ -1.8
RAE1P78406 RNU7-51P-201ENST00000516560 62 ntBASIC3.8□□□□□ -1.8
RAE1P78406 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.8□□□□□ -1.8
RAE1P78406 RAB9BP1-201ENST00000519581 626 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms