Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RNU6-339P-201ENST00000384310 107 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AL024474.1-201ENST00000404655 591 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 RNU6-272P-201ENST00000411028 104 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 RN7SKP192-201ENST00000411291 327 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
AP1S1P61966 HMGB3P31-201ENST00000413333 595 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S1P61966 Z98742.3-201ENST00000418637 326 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 PAICSP7-201ENST00000419829 962 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.22□□□□□ -2.05
AP1S1P61966 AL513321.1-201ENST00000441175 761 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.22□□□□□ -2.05
AP1S1P61966 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.22□□□□□ -2.05
AP1S1P61966 AC004263.1-201ENST00000479327 332 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
AP1S1P61966 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S1P61966 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S1P61966 AC090616.3-201ENST00000582184 217 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S1P61966 AC106028.5-201ENST00000610332 395 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
AP1S1P61966 STMN1P1-201ENST00000617809 440 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AC024595.1-201ENST00000623088 387 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AC090617.9-201ENST00000623751 147 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
AP1S1P61966 CU459211.1-201ENST00000635667 749 ntBASIC2.22□□□□□ -2.05
AP1S1P61966 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S1P61966 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
AP1S1P61966 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S1P61966 RNU6-1249P-201ENST00000363237 111 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S1P61966 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
AP1S1P61966 TAF9BP2-201ENST00000400856 499 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 SFR1P1-201ENST00000403720 688 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 FNDC3CP-201ENST00000420795 1155 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 ARL2BPP3-201ENST00000421226 480 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 AC092685.1-201ENST00000447960 1243 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 HMGN1P5-201ENST00000448591 263 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AL139109.1-201ENST00000455491 297 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 RPS4XP6-201ENST00000477670 797 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 RNF138P1-201ENST00000502765 546 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S1P61966 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S1P61966 AP001317.1-201ENST00000531194 960 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.21□□□□□ -2.06
AP1S1P61966 AC004217.3-201ENST00000551552 878 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S1P61966 AMZ2P1-203ENST00000565833 850 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AC090666.1-201ENST00000578241 445 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S1P61966 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S1P61966 AL590396.2-201ENST00000636511 1041 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AC083865.1-201ENST00000636634 831 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 AC017104.5-201ENST00000637647 639 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.21□□□□□ -2.06
AP1S1P61966 AC090740.1-201ENST00000623193 2262 ntBASIC2.21□□□□□ -2.06
AP1S1P61966 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.2□□□□□ -2.06
AP1S1P61966 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP1S1P61966 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.2□□□□□ -2.06
AP1S1P61966 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 RNU1-52P-201ENST00000384190 164 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
AP1S1P61966 MTCO3P12-201ENST00000416718 547 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 RPS3AP9-201ENST00000417027 792 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AL355994.1-201ENST00000424379 260 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AL353705.4-201ENST00000449661 238 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.2□□□□□ -2.06
AP1S1P61966 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.2□□□□□ -2.06
AP1S1P61966 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.2□□□□□ -2.06
AP1S1P61966 AC104090.1-201ENST00000506341 1171 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 OR5BM1P-201ENST00000512021 366 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 TTC39CP1-201ENST00000512513 755 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AC104057.1-201ENST00000515547 497 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.2□□□□□ -2.06
AP1S1P61966 AP001804.3-201ENST00000525146 880 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.2□□□□□ -2.06
AP1S1P61966 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.2□□□□□ -2.06
AP1S1P61966 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.2□□□□□ -2.06
AP1S1P61966 RPS3AP23-202ENST00000574601 686 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.2□□□□□ -2.06
AP1S1P61966 AC012254.4-201ENST00000588843 273 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AC013562.2-201ENST00000611632 603 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 AC090116.1-201ENST00000615679 446 ntBASIC2.2□□□□□ -2.06
AP1S1P61966 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
AP1S1P61966 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
AP1S1P61966 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
AP1S1P61966 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
AP1S1P61966 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
AP1S1P61966 RPL21P132-201ENST00000331267 462 ntBASIC2.19□□□□□ -2.06
AP1S1P61966 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
AP1S1P61966 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms