Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC096664.2-201ENST00000411843 406 ntBASIC3.23□□□□□ -1.89
PEX3P56589 RAP1BP1-201ENST00000412709 553 ntBASIC3.23□□□□□ -1.89
PEX3P56589 TPMTP2-201ENST00000414372 726 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.23□□□□□ -1.89
PEX3P56589 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.23□□□□□ -1.89
PEX3P56589 MTND4P6-201ENST00000438297 472 ntBASIC3.23□□□□□ -1.89
PEX3P56589 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.23□□□□□ -1.89
PEX3P56589 MTCYBP3-201ENST00000445588 1137 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.23□□□□□ -1.89
PEX3P56589 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.23□□□□□ -1.89
PEX3P56589 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
PEX3P56589 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
PEX3P56589 RPS4XP13-201ENST00000483219 789 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
PEX3P56589 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.23□□□□□ -1.89
PEX3P56589 AC098862.1-201ENST00000504991 413 ntBASIC3.23□□□□□ -1.89
PEX3P56589 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.23□□□□□ -1.89
PEX3P56589 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.23□□□□□ -1.89
PEX3P56589 RN7SKP43-201ENST00000516173 320 ntBASIC3.23□□□□□ -1.89
PEX3P56589 ZNF321P-202ENST00000550843 495 ntBASIC3.23□□□□□ -1.89
PEX3P56589 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.23□□□□□ -1.89
PEX3P56589 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.23□□□□□ -1.89
PEX3P56589 AL353778.1-201ENST00000603149 408 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC006270.3-201ENST00000605967 1036 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC093732.2-201ENST00000607950 274 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC090425.2-201ENST00000608818 501 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
PEX3P56589 AC007490.1-201ENST00000624321 703 ntBASIC3.23□□□□□ -1.89
PEX3P56589 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.23□□□□□ -1.89
PEX3P56589 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.23□□□□□ -1.89
PEX3P56589 MTND2P41-201ENST00000637599 773 ntBASIC3.23□□□□□ -1.89
PEX3P56589 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 AL035425.3-201ENST00000564206 4996 ntBASIC3.23□□□□□ -1.89
PEX3P56589 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PEX3P56589 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.23□□□□□ -1.89
PEX3P56589 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PEX3P56589 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PEX3P56589 SNORA4.1-201ENST00000364263 144 ntBASIC3.22□□□□□ -1.89
PEX3P56589 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PEX3P56589 RPL5P18-201ENST00000406671 891 ntBASIC3.22□□□□□ -1.89
PEX3P56589 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 DUTP6-201ENST00000425573 462 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC007742.1-201ENST00000425789 329 ntBASIC3.22□□□□□ -1.89
PEX3P56589 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 AL139132.1-201ENST00000431587 344 ntBASIC3.22□□□□□ -1.89
PEX3P56589 ELOCP26-201ENST00000436067 329 ntBASIC3.22□□□□□ -1.89
PEX3P56589 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 ARPC3P5-201ENST00000448802 534 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 AC098826.2-201ENST00000452011 651 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.22□□□□□ -1.89
PEX3P56589 SUMO2P2-201ENST00000456482 255 ntBASIC3.22□□□□□ -1.89
PEX3P56589 RN7SL283P-201ENST00000489055 303 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC078918.1-201ENST00000498515 228 ntBASIC3.22□□□□□ -1.89
PEX3P56589 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.22□□□□□ -1.89
PEX3P56589 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 RNU6-27P-201ENST00000516146 107 ntBASIC3.22□□□□□ -1.89
PEX3P56589 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PEX3P56589 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.22□□□□□ -1.89
PEX3P56589 EEF1B2P4-201ENST00000551398 348 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC002400.1-201ENST00000569310 726 ntBASIC3.22□□□□□ -1.89
PEX3P56589 MIR4999-201ENST00000585029 91 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.22□□□□□ -1.89
PEX3P56589 AL355812.1-201ENST00000603215 216 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AL031281.1-201ENST00000604049 488 ntBASIC3.22□□□□□ -1.89
PEX3P56589 IGHV3-29-201ENST00000604817 344 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC080013.4-201ENST00000607624 649 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC006329.2-201ENST00000611491 394 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AL136981.2-201ENST00000617319 734 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC004009.2-201ENST00000623016 728 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AC040168.1-201ENST00000623594 991 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AP003485.2-201ENST00000623636 610 ntBASIC3.22□□□□□ -1.89
PEX3P56589 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PEX3P56589 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PEX3P56589 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PEX3P56589 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PEX3P56589 AC011477.1-204ENST00000623416 1325 ntBASIC3.21□□□□□ -1.89
PEX3P56589 SGO1P2-201ENST00000429458 1589 ntBASIC3.21□□□□□ -1.89
PEX3P56589 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PEX3P56589 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PEX3P56589 MTND5P7-201ENST00000413558 1798 ntBASIC3.21□□□□□ -1.9
PEX3P56589 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PEX3P56589 SNORA9.2-201ENST00000365361 133 ntBASIC3.21□□□□□ -1.9
PEX3P56589 SNORD51-201ENST00000384320 80 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
PEX3P56589 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
PEX3P56589 PSMA6P3-201ENST00000428242 164 ntBASIC3.21□□□□□ -1.9
PEX3P56589 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.21□□□□□ -1.9
PEX3P56589 EEF1E1P1-201ENST00000446998 430 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms