Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MTND3P23-201ENST00000431980 347 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 MTND4P25-201ENST00000441039 533 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AL590399.6-201ENST00000446396 307 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 TPT1P14-201ENST00000448018 505 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AL356010.1-201ENST00000456364 102 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 MTND1P11-201ENST00000456661 876 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC008628.2-201ENST00000502605 298 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC018710.1-201ENST00000506509 158 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC017037.2-201ENST00000513850 890 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 RNU2-10P-201ENST00000516375 211 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 RNU6-835P-201ENST00000516974 104 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC103783.1-201ENST00000520506 373 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC063950.1-201ENST00000552036 308 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC055876.1-202ENST00000567053 138 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC6A4P31645 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC008945.2-201ENST00000606056 604 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 DISC2.1-201ENST00000612827 205 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 AL603758.1-201ENST00000618654 241 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 AC138649.5-201ENST00000637456 137 ntBASIC4.26□□□□□ -1.73
SLC6A4P31645 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC6A4P31645 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC6A4P31645 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC087190.4-201ENST00000574616 8334 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 HSPE1P11-201ENST00000339579 310 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 Y_RNA.11-201ENST00000362375 109 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SLC6A4P31645 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SLC6A4P31645 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 LAP3P1-201ENST00000403648 294 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 RPL21P65-201ENST00000406094 466 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AL356776.1-201ENST00000406574 447 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 RNU6-373P-201ENST00000411247 98 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AL117339.2-201ENST00000430475 180 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 GTF2IP20-201ENST00000431663 360 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AL606489.2-201ENST00000433886 234 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 RPL23AP89-201ENST00000439324 255 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 BNIP3P2-201ENST00000441221 577 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC016691.1-201ENST00000441321 413 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 USP9YP8-201ENST00000441913 500 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 HSFY6P-201ENST00000445573 403 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 RNU7-63P-201ENST00000459054 62 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 SCARNA24.1-201ENST00000516465 137 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AF186190.1-201ENST00000517470 480 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 OR5BN1P-201ENST00000532955 829 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 CR383656.7-201ENST00000548164 174 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 DYNLL1P4-201ENST00000549314 266 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC034105.3-201ENST00000565294 442 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC006254.3-201ENST00000603353 884 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AL031176.1-201ENST00000604554 466 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 BNIP3P10-201ENST00000605360 577 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 RNU4-89P-201ENST00000607443 133 ntBASIC4.25□□□□□ -1.73
SLC6A4P31645 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SLC6A4P31645 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC6A4P31645 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC6A4P31645 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms