Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC011260.1-201ENST00000578420 472 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AC011468.4-201ENST00000603942 409 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AP001330.4-201ENST00000604350 154 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC8P31273 AC135507.2-201ENST00000612443 309 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 AL355810.1-201ENST00000614629 552 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXC8P31273 AL353743.1-202ENST00000431724 1695 ntBASIC3.68□□□□□ -1.82
HOXC8P31273 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC8P31273 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC8P31273 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC8P31273 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC8P31273 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC8P31273 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC8P31273 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 RNU6-28P-201ENST00000362378 107 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 UBA52P6-201ENST00000399822 382 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 HMGB1P17-201ENST00000403495 628 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AL391417.1-201ENST00000404100 426 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 MIR1284-201ENST00000408337 120 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 RN7SKP56-201ENST00000410513 331 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 PIGPP2-201ENST00000411569 458 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 AC010153.1-201ENST00000432862 727 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC098826.1-201ENST00000433943 471 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AL590103.1-201ENST00000434488 307 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC129850.1-201ENST00000436203 508 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 ARPC3P5-201ENST00000448802 534 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC8P31273 RPL23AP35-201ENST00000451906 501 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 TRGVB-201ENST00000453257 471 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 Z82190.1-201ENST00000454534 490 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC8P31273 AC078785.3-201ENST00000476607 425 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC8P31273 AC011825.1-201ENST00000484967 388 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 RPS3AP50-201ENST00000487064 803 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC096751.1-202ENST00000502691 1067 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 HMGB3P15-201ENST00000507326 574 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 RNU1-61P-201ENST00000516107 151 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC8P31273 AC007954.1-201ENST00000554198 494 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC8P31273 AC090615.1-201ENST00000577519 154 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AP001981.2-201ENST00000603241 418 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AC012557.2-201ENST00000605919 418 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 AL356321.1-201ENST00000621360 228 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 AC011477.1-204ENST00000623416 1325 ntBASIC3.67□□□□□ -1.82
HOXC8P31273 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXC8P31273 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC8P31273 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HOXC8P31273 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HOXC8P31273 MTND4P34-201ENST00000572715 1371 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC8P31273 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC8P31273 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HOXC8P31273 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXC8P31273 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC8P31273 Y_RNA.77-201ENST00000362962 107 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 Y_RNA.201-201ENST00000364052 96 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 MT-TH-201ENST00000387441 69 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 RPS3AP26-201ENST00000398259 784 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 AP000567.1-201ENST00000406413 156 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 NPM1P11-201ENST00000417106 855 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC8P31273 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 NEK4P1-201ENST00000433383 879 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXC8P31273 SDCBPP1-201ENST00000440192 890 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AL360221.1-201ENST00000445989 335 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AC097493.1-201ENST00000463958 372 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AC072039.1-201ENST00000477611 581 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AL049873.1-201ENST00000480540 376 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC8P31273 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXC8P31273 LTV1P1-201ENST00000510683 1237 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 RNU1-103P-201ENST00000516502 125 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 RPL12P22-201ENST00000519073 490 ntBASIC3.66□□□□□ -1.82
HOXC8P31273 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms