Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL121871.1-201ENST00000443413 436 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 TPTE2P5-203ENST00000458118 728 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 RPL30P9-201ENST00000465586 330 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AC020893.1-201ENST00000502452 580 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC110794.1-201ENST00000505816 425 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 KLHL2P1-201ENST00000508691 521 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA13P31271 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.73□□□□□ -1.81
HOXA13P31271 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC034268.2-201ENST00000571784 482 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC136618.2-201ENST00000575091 400 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.73□□□□□ -1.81
HOXA13P31271 AC073657.2-201ENST00000605661 303 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 uc_338.1-201ENST00000612113 180 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AC008443.7-201ENST00000622195 246 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 AC007494.3-201ENST00000624660 743 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 PCMTD1P7-201ENST00000634506 357 ntBASIC3.73□□□□□ -1.81
HOXA13P31271 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXA13P31271 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXA13P31271 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HOXA13P31271 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HOXA13P31271 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
HOXA13P31271 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HOXA13P31271 SNORA31-201ENST00000362607 130 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 MIR23A-201ENST00000385245 73 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 SNORA48.2-201ENST00000390926 124 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 RNU2-37P-201ENST00000410695 177 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA13P31271 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 AC099677.1-201ENST00000420575 175 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA13P31271 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 AL390023.1-201ENST00000428836 262 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA13P31271 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA13P31271 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA13P31271 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC093278.1-201ENST00000494700 600 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AP001086.1-201ENST00000494882 321 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC068305.1-201ENST00000497406 726 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 MIR2114-201ENST00000516645 80 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AP004247.1-201ENST00000531556 1289 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC068587.4-201ENST00000533893 186 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA13P31271 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXA13P31271 AL353997.4-201ENST00000586196 166 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 MTCYBP22-201ENST00000603788 447 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXA13P31271 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 AC017071.1-201ENST00000564407 2204 ntBASIC3.72□□□□□ -1.81
HOXA13P31271 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXA13P31271 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXA13P31271 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXA13P31271 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.81
HOXA13P31271 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HOXA13P31271 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 MIR128-1-201ENST00000384921 82 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 RNA5SP229-201ENST00000410809 99 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 RNU6-920P-201ENST00000410926 92 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AC109780.2-201ENST00000413467 845 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA13P31271 RPL23AP39-201ENST00000415533 405 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 EZH2P1-201ENST00000431167 291 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA13P31271 AL671855.1-201ENST00000446875 1203 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 MRPS31P2-201ENST00000451581 518 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 RPS24P6-201ENST00000452670 400 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 ZNF114P1-201ENST00000453500 292 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA13P31271 OR6K1P-201ENST00000456766 971 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA13P31271 RPL30P6-201ENST00000475925 342 ntBASIC3.71□□□□□ -1.82
HOXA13P31271 RPL31P13-201ENST00000484151 370 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms