Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-1003P-201ENST00000517099 105 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC103843.2-201ENST00000530523 682 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC013828.2-201ENST00000532487 235 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2AP24928 MIR5680-201ENST00000577577 84 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.3□□□□□ -1.72
POLR2AP24928 AC060780.3-201ENST00000589464 80 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2AP24928 AL356274.1-201ENST00000617064 410 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2AP24928 AC126323.6-202ENST00000568092 3511 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.3□□□□□ -1.72
POLR2AP24928 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
POLR2AP24928 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR2AP24928 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2AP24928 RNU4-1-201ENST00000363925 141 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 KCTD9P3-201ENST00000434597 1169 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC025750.2-201ENST00000442609 450 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2AP24928 Z82190.1-201ENST00000454534 490 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR2AP24928 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 AC010301.1-201ENST00000473936 355 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL035404.1-201ENST00000497982 568 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 PHBP14-201ENST00000512887 367 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC105417.1-201ENST00000514691 285 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 RPS3AP23-202ENST00000574601 686 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL355375.2-201ENST00000574825 175 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 VN1R84P-201ENST00000593697 235 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 YWHAQP7-201ENST00000603536 658 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL355472.4-201ENST00000610233 626 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 DISC2.1-201ENST00000612827 205 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC068722.2-201ENST00000618734 544 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 SCARNA15.3-201ENST00000626315 122 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 SCARNA4.1-201ENST00000628597 123 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 BDP1P-201ENST00000582658 1990 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2AP24928 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR2AP24928 SMG1P4-204ENST00000523028 4131 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC025125.1-201ENST00000624743 1922 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 RNU6-777P-201ENST00000364265 104 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2AP24928 EIF5P1-201ENST00000400019 1231 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL356432.1-201ENST00000405809 419 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL136131.1-201ENST00000406079 803 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2AP24928 MTCO3P21-201ENST00000430791 643 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 MRPL50P4-201ENST00000446432 475 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 ARPC3P5-201ENST00000448802 534 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2AP24928 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2AP24928 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.29□□□□□ -1.72
POLR2AP24928 AC027309.2-201ENST00000520566 192 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.29□□□□□ -1.72
POLR2AP24928 LSM3P2-201ENST00000551246 273 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 PSMA3P-201ENST00000555485 635 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 MIR4795-201ENST00000584182 89 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 MIR7112-201ENST00000616126 65 ntBASIC4.29□□□□□ -1.72
POLR2AP24928 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2AP24928 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
POLR2AP24928 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2AP24928 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2AP24928 MUC2-202ENST00000613187 4845 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 RPL23AP32-201ENST00000395315 459 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 RN7SKP32-201ENST00000410167 303 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 CDC27P2-201ENST00000425026 1922 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 RPL23AP4-201ENST00000427757 463 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2AP24928 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.28□□□□□ -1.72
POLR2AP24928 YWHAZP8-201ENST00000436935 731 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 CBX1P4-201ENST00000439415 457 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 RBMY2UP-201ENST00000453474 324 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2AP24928 AC099563.1-201ENST00000456086 418 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 AC098583.1-201ENST00000480875 255 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2AP24928 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 AF131216.2-201ENST00000512316 564 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 AC034159.1-201ENST00000513885 583 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 RNU6-583P-201ENST00000516012 92 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 IGKV2-36-201ENST00000519999 223 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.28□□□□□ -1.72
POLR2AP24928 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2AP24928 AC011611.1-201ENST00000552179 197 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms