Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPL23AP84-201ENST00000571193 464 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 SNORA74C-1-201ENST00000580726 201 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AC104763.2-201ENST00000604179 382 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 RNU6-89P-201ENST00000606519 100 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AL390240.1-201ENST00000612950 384 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 AL136221.1-201ENST00000621449 509 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 MIR6830-201ENST00000636015 70 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ERCC3P19447 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.48□□□□□ -1.53
ERCC3P19447 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
ERCC3P19447 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 SCN1A-220ENST00000641603 12506 ntBASIC5.48□□□□□ -1.53
ERCC3P19447 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ERCC3P19447 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ERCC3P19447 AP004289.2-201ENST00000444413 1457 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 LINC01355-201ENST00000566551 5444 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RNU1-82P-201ENST00000390851 165 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RN7SKP177-201ENST00000410567 355 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.47□□□□□ -1.53
ERCC3P19447 AC104333.2-201ENST00000422630 192 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 PDSS1P1-201ENST00000422953 1114 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.47□□□□□ -1.53
ERCC3P19447 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.47□□□□□ -1.53
ERCC3P19447 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.47□□□□□ -1.53
ERCC3P19447 CYCSP24-201ENST00000445119 316 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.47□□□□□ -1.53
ERCC3P19447 AL356981.1-201ENST00000454879 684 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AL590639.1-201ENST00000456484 337 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 snoU13.24-201ENST00000458998 104 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.47□□□□□ -1.53
ERCC3P19447 Vault.1-201ENST00000516474 102 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RNU6-352P-201ENST00000516908 107 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RNU6-677P-201ENST00000516914 101 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RNU6-1073P-201ENST00000517182 106 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC134698.5-201ENST00000519444 336 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.47□□□□□ -1.53
ERCC3P19447 AC005868.1-201ENST00000536421 331 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.47□□□□□ -1.53
ERCC3P19447 AC078814.3-201ENST00000553036 491 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC243960.4-201ENST00000600532 288 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC012409.4-201ENST00000612923 249 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 AC009248.2-201ENST00000619826 254 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.47□□□□□ -1.53
ERCC3P19447 OR52H1-202ENST00000641796 1061 ntBASIC5.47□□□□□ -1.53
ERCC3P19447 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.47□□□□□ -1.53
ERCC3P19447 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
ERCC3P19447 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.47□□□□□ -1.53
ERCC3P19447 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
ERCC3P19447 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
ERCC3P19447 TPTE2P4-201ENST00000258589 1605 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC3P19447 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ERCC3P19447 Y_RNA.61-201ENST00000362835 102 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 RNU4-25P-201ENST00000410569 230 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 RN7SKP140-201ENST00000411196 284 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.46□□□□□ -1.54
ERCC3P19447 CALM2P2-201ENST00000428512 440 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 AL365400.1-201ENST00000431854 640 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 USP9YP7-201ENST00000436723 430 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 HMGN2P21-201ENST00000447764 270 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 USP9YP32-201ENST00000452432 430 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 AC004801.2-202ENST00000463559 283 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 HSPE1P6-201ENST00000479457 291 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 RN7SKP60-201ENST00000516985 239 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 AC107953.1-201ENST00000522216 297 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC3P19447 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.46□□□□□ -1.54
ERCC3P19447 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.46□□□□□ -1.54
ERCC3P19447 RN7SL652P-201ENST00000577769 300 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 AC010928.3-201ENST00000587712 541 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 BDH2P1-201ENST00000602288 736 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 AC013553.2-201ENST00000604244 589 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.46□□□□□ -1.54
ERCC3P19447 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.46□□□□□ -1.54
ERCC3P19447 AL672167.1-203ENST00000641299 2975 ntBASIC5.46□□□□□ -1.54
ERCC3P19447 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ERCC3P19447 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ERCC3P19447 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.46□□□□□ -1.54
ERCC3P19447 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ERCC3P19447 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.45□□□□□ -1.54
ERCC3P19447 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms