Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL161729.4-201ENST00000604650 476 ntBASIC3.85□□□□□ -1.79
CD53P19397 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.85□□□□□ -1.79
CD53P19397 AC004852.3-201ENST00000614131 326 ntBASIC3.85□□□□□ -1.79
CD53P19397 AC006065.6-201ENST00000625201 545 ntBASIC3.85□□□□□ -1.79
CD53P19397 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.85□□□□□ -1.79
CD53P19397 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CD53P19397 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD53P19397 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD53P19397 CCT4P2-201ENST00000233836 1548 ntBASIC3.85□□□□□ -1.79
CD53P19397 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.85□□□□□ -1.79
CD53P19397 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD53P19397 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD53P19397 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.79
CD53P19397 Z82217.1-201ENST00000625157 8149 ntBASIC3.84□□□□□ -1.79
CD53P19397 SPRR2C-201ENST00000290702 219 ntBASIC3.84□□□□□ -1.79
CD53P19397 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
CD53P19397 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.84□□□□□ -1.79
CD53P19397 RNU6-623P-201ENST00000363143 105 ntBASIC3.84□□□□□ -1.79
CD53P19397 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.84□□□□□ -1.79
CD53P19397 MIR19A-201ENST00000384878 82 ntBASIC3.84□□□□□ -1.79
CD53P19397 MT-TH-201ENST00000387441 69 ntBASIC3.84□□□□□ -1.79
CD53P19397 RNU6-278P-201ENST00000390945 109 ntBASIC3.84□□□□□ -1.79
CD53P19397 SNORD66.1-201ENST00000391230 76 ntBASIC3.84□□□□□ -1.79
CD53P19397 RPL17P12-201ENST00000413391 526 ntBASIC3.84□□□□□ -1.79
CD53P19397 DPPA2P1-201ENST00000428060 556 ntBASIC3.84□□□□□ -1.79
CD53P19397 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.84□□□□□ -1.79
CD53P19397 MTCYBP39-201ENST00000437562 491 ntBASIC3.84□□□□□ -1.79
CD53P19397 TRIM60P18-201ENST00000441518 828 ntBASIC3.84□□□□□ -1.79
CD53P19397 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.84□□□□□ -1.79
CD53P19397 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.84□□□□□ -1.79
CD53P19397 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.84□□□□□ -1.79
CD53P19397 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
CD53P19397 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.84□□□□□ -1.79
CD53P19397 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.84□□□□□ -1.79
CD53P19397 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 SNORA31.21-201ENST00000517180 77 ntBASIC3.84□□□□□ -1.79
CD53P19397 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 AC068790.2-201ENST00000602601 557 ntBASIC3.84□□□□□ -1.79
CD53P19397 AL606834.2-201ENST00000602954 668 ntBASIC3.84□□□□□ -1.79
CD53P19397 AP001981.2-201ENST00000603241 418 ntBASIC3.84□□□□□ -1.79
CD53P19397 RN7SKP299-201ENST00000606679 301 ntBASIC3.84□□□□□ -1.79
CD53P19397 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.84□□□□□ -1.79
CD53P19397 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.84□□□□□ -1.79
CD53P19397 AC010680.1-201ENST00000590024 3590 ntBASIC3.84□□□□□ -1.8
CD53P19397 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CD53P19397 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
CD53P19397 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CD53P19397 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD53P19397 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CD53P19397 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD53P19397 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CD53P19397 MIR383-201ENST00000362257 73 ntBASIC3.83□□□□□ -1.8
CD53P19397 MIR3065-201ENST00000390137 79 ntBASIC3.83□□□□□ -1.8
CD53P19397 Z98941.1-201ENST00000407764 100 ntBASIC3.83□□□□□ -1.8
CD53P19397 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
CD53P19397 RNU6-628P-201ENST00000410675 107 ntBASIC3.83□□□□□ -1.8
CD53P19397 NPM1P11-201ENST00000417106 855 ntBASIC3.83□□□□□ -1.8
CD53P19397 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 ARPC3P1-201ENST00000437218 533 ntBASIC3.83□□□□□ -1.8
CD53P19397 LARP1BP3-201ENST00000437229 869 ntBASIC3.83□□□□□ -1.8
CD53P19397 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 RPL23AP89-201ENST00000439324 255 ntBASIC3.83□□□□□ -1.8
CD53P19397 PIGFP3-201ENST00000441918 722 ntBASIC3.83□□□□□ -1.8
CD53P19397 AP000936.2-201ENST00000447151 681 ntBASIC3.83□□□□□ -1.8
CD53P19397 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 AC108059.3-201ENST00000456388 214 ntBASIC3.83□□□□□ -1.8
CD53P19397 RPL36AP13-201ENST00000457490 317 ntBASIC3.83□□□□□ -1.8
CD53P19397 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 AC108475.1-201ENST00000507880 950 ntBASIC3.83□□□□□ -1.8
CD53P19397 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.83□□□□□ -1.8
CD53P19397 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CD53P19397 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CD53P19397 AC007115.1-201ENST00000546853 234 ntBASIC3.83□□□□□ -1.8
CD53P19397 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.83□□□□□ -1.8
CD53P19397 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.83□□□□□ -1.8
CD53P19397 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
CD53P19397 PRELID3BP8-201ENST00000604148 295 ntBASIC3.83□□□□□ -1.8
CD53P19397 AC107214.2-201ENST00000608204 634 ntBASIC3.83□□□□□ -1.8
CD53P19397 AL158063.1-201ENST00000615349 536 ntBASIC3.83□□□□□ -1.8
CD53P19397 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CD53P19397 ZNF833P-201ENST00000424938 1494 ntBASIC3.83□□□□□ -1.8
CD53P19397 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 ZNF826P-207ENST00000622273 1910 ntBASIC3.83□□□□□ -1.8
CD53P19397 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.83□□□□□ -1.8
CD53P19397 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CD53P19397 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.82□□□□□ -1.8
CD53P19397 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD53P19397 GABRG2-229ENST00000641017 3628 ntBASIC3.82□□□□□ -1.8
CD53P19397 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms