Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 RNA5SP42-201ENST00000364278 115 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 AL357075.1-201ENST00000404107 726 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 RNA5SP239-201ENST00000410218 129 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 RNU6-248P-201ENST00000410720 107 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 HMGN1P24-201ENST00000412282 298 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 USP9YP13-201ENST00000417797 480 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 DNAJC19P4-201ENST00000440115 345 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 MTCO1P48-201ENST00000448024 1096 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 HMGB3P21-201ENST00000452483 547 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC126182.1-201ENST00000478134 357 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 AC114981.1-201ENST00000503897 678 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXC6P09630 FTH1P9-201ENST00000513251 355 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 AC005798.1-201ENST00000513715 387 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC6P09630 MIR544B-201ENST00000582372 78 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 MIR4512-201ENST00000583257 77 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 NF1P5-201ENST00000588287 448 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 BNIP3P30-201ENST00000601184 574 ntBASIC3.88□□□□□ -1.79
HOXC6P09630 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC6P09630 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC6P09630 AP002907.1-201ENST00000606361 1430 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 OR4G2P-201ENST00000328113 903 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 RNU6-867P-201ENST00000364956 107 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 RNU6-809P-201ENST00000384461 107 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 Y_RNA.500-201ENST00000384466 111 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 Y_RNA.582-201ENST00000391023 95 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 BTF3P7-201ENST00000407097 488 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 AL445669.1-201ENST00000426743 755 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC6P09630 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC6P09630 SKP1P1-201ENST00000438081 489 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 PAXBP1P1-201ENST00000449315 447 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 USP9YP12-201ENST00000450481 570 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AL033528.1-201ENST00000453780 140 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC010301.1-201ENST00000473936 355 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 LARP1BP2-201ENST00000486594 519 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 MTAPP1-201ENST00000489154 819 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 TMEM251P1-201ENST00000503717 318 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXC6P09630 RN7SKP244-201ENST00000516513 307 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 RNU6-314P-201ENST00000516574 104 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 RN7SKP96-201ENST00000516948 297 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC6P09630 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 ARL2BPP5-201ENST00000523141 481 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 AP004247.1-201ENST00000531556 1289 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC6P09630 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC6P09630 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC6P09630 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC6P09630 HMGB1P50-201ENST00000605814 607 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC008250.2-201ENST00000615261 205 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AC104010.1-201ENST00000616889 150 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 RMST_9.1-201ENST00000619945 193 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 AL157786.1-207ENST00000627771 695 ntBASIC3.87□□□□□ -1.79
HOXC6P09630 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC6P09630 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC6P09630 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 AC093010.3-201ENST00000570269 15214 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 AC073073.2-201ENST00000609827 2578 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC6P09630 RNU6-283P-201ENST00000364788 107 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 RNY3P14-201ENST00000384309 102 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 RPS3AP36-201ENST00000398190 775 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 DHFRP6-201ENST00000401776 268 ntBASIC3.86□□□□□ -1.79
HOXC6P09630 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC6P09630 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms