Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 DUXAP4-201ENST00000603046 613 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AL139286.1-201ENST00000604465 483 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AL158211.4-201ENST00000606988 584 ntBASIC3.58□□□□□ -1.84
LDB3O75112 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 Y_RNA.804-201ENST00000615262 101 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AP001506.1-201ENST00000615444 211 ntBASIC3.58□□□□□ -1.84
LDB3O75112 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LDB3O75112 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 MTND4P29-201ENST00000503122 1372 ntBASIC3.58□□□□□ -1.84
LDB3O75112 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.58□□□□□ -1.84
LDB3O75112 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB3O75112 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 XIAPP3-201ENST00000312918 795 ntBASIC3.57□□□□□ -1.84
LDB3O75112 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LDB3O75112 RNU6-744P-201ENST00000365557 107 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 RNU6-761P-201ENST00000384148 107 ntBASIC3.57□□□□□ -1.84
LDB3O75112 Y_RNA.453-201ENST00000384223 109 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RNU6-1316P-201ENST00000384242 108 ntBASIC3.57□□□□□ -1.84
LDB3O75112 MTCO3P40-201ENST00000392516 676 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 RNU2-15P-201ENST00000410692 191 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 AC016831.2-201ENST00000417179 352 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB3O75112 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB3O75112 AC244098.2-201ENST00000422068 99 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC092017.2-201ENST00000427600 362 ntBASIC3.57□□□□□ -1.84
LDB3O75112 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
LDB3O75112 SKP1P1-201ENST00000438081 489 ntBASIC3.57□□□□□ -1.84
LDB3O75112 SNORA71B-202ENST00000439232 272 ntBASIC3.57□□□□□ -1.84
LDB3O75112 MTATP6P30-201ENST00000443540 664 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AP000542.1-201ENST00000448473 371 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC079448.1-201ENST00000449377 373 ntBASIC3.57□□□□□ -1.84
LDB3O75112 PSPHP1-201ENST00000450062 261 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC133473.1-201ENST00000455173 299 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RPS20P32-201ENST00000456044 356 ntBASIC3.57□□□□□ -1.84
LDB3O75112 MTCO1P42-201ENST00000457379 726 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RPS20P24-201ENST00000457473 361 ntBASIC3.57□□□□□ -1.84
LDB3O75112 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LDB3O75112 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB3O75112 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB3O75112 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC034222.1-201ENST00000494052 532 ntBASIC3.57□□□□□ -1.84
LDB3O75112 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 AC009646.1-201ENST00000510455 318 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC010342.1-201ENST00000514047 877 ntBASIC3.57□□□□□ -1.84
LDB3O75112 SNORA20.3-201ENST00000516880 132 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC090281.1-201ENST00000523019 276 ntBASIC3.57□□□□□ -1.84
LDB3O75112 OR5AQ1P-201ENST00000527596 927 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB3O75112 AC024224.1-201ENST00000538284 609 ntBASIC3.57□□□□□ -1.84
LDB3O75112 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB3O75112 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 AC090615.1-201ENST00000577519 154 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB3O75112 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
LDB3O75112 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.57□□□□□ -1.84
LDB3O75112 TPMTP1-201ENST00000592307 737 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB3O75112 C8orf59P2-201ENST00000603441 271 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB3O75112 AC008945.2-201ENST00000606056 604 ntBASIC3.57□□□□□ -1.84
LDB3O75112 RMST_9.1-201ENST00000619945 193 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC079684.1-201ENST00000621405 437 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AL359880.1-201ENST00000621879 266 ntBASIC3.57□□□□□ -1.84
LDB3O75112 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB3O75112 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB3O75112 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
LDB3O75112 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB3O75112 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.56□□□□□ -1.84
LDB3O75112 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB3O75112 AC092447.10-201ENST00000620607 1652 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AP004289.2-201ENST00000444413 1457 ntBASIC3.56□□□□□ -1.84
LDB3O75112 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AL354685.2-201ENST00000448218 1447 ntBASIC3.56□□□□□ -1.84
LDB3O75112 U8.3-201ENST00000363321 132 ntBASIC3.56□□□□□ -1.84
LDB3O75112 Y_RNA.126-201ENST00000363382 111 ntBASIC3.56□□□□□ -1.84
LDB3O75112 RNA5SP322-201ENST00000363617 119 ntBASIC3.56□□□□□ -1.84
LDB3O75112 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB3O75112 RPL32P23-201ENST00000397237 405 ntBASIC3.56□□□□□ -1.84
LDB3O75112 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
LDB3O75112 FGF7P8-201ENST00000402994 292 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AL356967.1-201ENST00000406305 431 ntBASIC3.56□□□□□ -1.84
LDB3O75112 FCF1P10-201ENST00000407590 479 ntBASIC3.56□□□□□ -1.84
LDB3O75112 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
LDB3O75112 AC009961.2-201ENST00000435771 251 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms