Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.47□□□□□ -1.85
CACNA1FO60840 BNIP3P26-201ENST00000600827 554 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AP003465.2-201ENST00000602571 373 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 NTAN1P1-201ENST00000603150 646 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 BNIP3P4-201ENST00000604946 565 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 AC109315.1-201ENST00000584143 1347 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 GTF2H2B-203ENST00000508065 1432 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.47□□□□□ -1.85
CACNA1FO60840 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.47□□□□□ -1.85
CACNA1FO60840 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 HMGB1P5-201ENST00000255320 642 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 XIAPP3-201ENST00000312918 795 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA1FO60840 AC098592.1-201ENST00000419352 333 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 OR2B8P-201ENST00000432841 938 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.47□□□□□ -1.85
CACNA1FO60840 RPL7P29-201ENST00000437151 728 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AL353572.1-201ENST00000442490 417 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 NPM1P49-201ENST00000448027 714 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA1FO60840 SNORD109B-201ENST00000458961 67 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 SNORD109A-201ENST00000459128 67 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC012170.1-201ENST00000495139 359 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA1FO60840 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
CACNA1FO60840 ACTR3BP3-201ENST00000565577 979 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC083760.1-201ENST00000589621 670 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.47□□□□□ -1.85
CACNA1FO60840 VN1R79P-201ENST00000593540 513 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC022146.1-201ENST00000595307 847 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC073544.2-201ENST00000601155 540 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC131235.4-201ENST00000609288 620 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 MIR7973-1-201ENST00000614683 76 ntBASIC3.47□□□□□ -1.85
CACNA1FO60840 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CACNA1FO60840 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CACNA1FO60840 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.46□□□□□ -1.86
CACNA1FO60840 SNORA80A-201ENST00000363922 136 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 RNU6-157P-201ENST00000383957 107 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 Y_RNA.553-201ENST00000384670 102 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 MIR320B1-201ENST00000390209 79 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AL451074.5-201ENST00000415894 435 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 DPRXP1-201ENST00000426312 460 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.46□□□□□ -1.86
CACNA1FO60840 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 FTH1P1-201ENST00000437933 532 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC009969.1-201ENST00000438726 172 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.46□□□□□ -1.86
CACNA1FO60840 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.46□□□□□ -1.86
CACNA1FO60840 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.46□□□□□ -1.86
CACNA1FO60840 AP001317.1-201ENST00000531194 960 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.46□□□□□ -1.86
CACNA1FO60840 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC022884.3-201ENST00000579571 248 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 MIR4666A-201ENST00000580160 79 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 MIR4801-201ENST00000582704 82 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC107304.1-201ENST00000604229 296 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AP003973.1-201ENST00000604639 691 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 STMN1P1-201ENST00000617809 440 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC073534.2-201ENST00000620377 381 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC008443.7-201ENST00000622195 246 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AL359740.1-201ENST00000624340 592 ntBASIC3.46□□□□□ -1.86
CACNA1FO60840 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.46□□□□□ -1.86
CACNA1FO60840 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CACNA1FO60840 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.46□□□□□ -1.86
CACNA1FO60840 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.46□□□□□ -1.86
CACNA1FO60840 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.46□□□□□ -1.86
CACNA1FO60840 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CACNA1FO60840 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 U3.4-201ENST00000363352 213 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
CACNA1FO60840 RNU6-317P-201ENST00000384031 107 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 RNU6-757P-201ENST00000410334 100 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 RPL31P54-201ENST00000429803 370 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AL353093.1-201ENST00000441292 436 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 MTCO2P25-201ENST00000447065 681 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 RPL7P18-201ENST00000478965 734 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 NCOR1P1-202ENST00000486162 291 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.45□□□□□ -1.86
CACNA1FO60840 FTH1P9-201ENST00000513251 355 ntBASIC3.45□□□□□ -1.86
CACNA1FO60840 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.45□□□□□ -1.86
CACNA1FO60840 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.45□□□□□ -1.86
CACNA1FO60840 MTCO3P24-201ENST00000572729 782 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms