Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MTCO1P49-201ENST00000523429 802 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX3O60493 HIGD1AP10-201ENST00000527837 282 ntBASIC3.23□□□□□ -1.89
SNX3O60493 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX3O60493 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX3O60493 SETP2-201ENST00000553886 926 ntBASIC3.23□□□□□ -1.89
SNX3O60493 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
SNX3O60493 ZNF192P1-203ENST00000565888 810 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC116096.1-201ENST00000566804 2314 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC015917.1-201ENST00000579654 510 ntBASIC3.23□□□□□ -1.89
SNX3O60493 MIR3939-201ENST00000582614 106 ntBASIC3.23□□□□□ -1.89
SNX3O60493 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX3O60493 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX3O60493 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
SNX3O60493 Z99497.2-201ENST00000603634 310 ntBASIC3.23□□□□□ -1.89
SNX3O60493 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 AC090425.2-201ENST00000608818 501 ntBASIC3.23□□□□□ -1.89
SNX3O60493 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 MIR6130-201ENST00000619419 109 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 AL356321.1-201ENST00000621360 228 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AL354798.1-201ENST00000622505 329 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC243312.2-201ENST00000623340 601 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AF127577.6-201ENST00000623352 2191 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC091965.5-201ENST00000624785 342 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX3O60493 AC005183.1-201ENST00000603687 1979 ntBASIC3.23□□□□□ -1.89
SNX3O60493 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX3O60493 AC012321.1-201ENST00000561622 1588 ntBASIC3.22□□□□□ -1.89
SNX3O60493 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNX3O60493 RNU6-637P-201ENST00000384050 107 ntBASIC3.22□□□□□ -1.89
SNX3O60493 MTCYBP36-201ENST00000404146 440 ntBASIC3.22□□□□□ -1.89
SNX3O60493 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC009518.2-201ENST00000418056 731 ntBASIC3.22□□□□□ -1.89
SNX3O60493 YPEL5P1-201ENST00000419731 367 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AL389915.1-201ENST00000422463 466 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AC093151.1-201ENST00000427711 313 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RPL26P6-201ENST00000440913 438 ntBASIC3.22□□□□□ -1.89
SNX3O60493 MTND1P30-201ENST00000441241 901 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX3O60493 RPS12P18-201ENST00000442381 270 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RPL36AP33-201ENST00000450395 310 ntBASIC3.22□□□□□ -1.89
SNX3O60493 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 MTND1P9-201ENST00000453775 944 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RPS7P7-201ENST00000463499 571 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RPL21P104-201ENST00000464143 478 ntBASIC3.22□□□□□ -1.89
SNX3O60493 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC026801.2-201ENST00000515352 425 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RN7SKP43-201ENST00000516173 320 ntBASIC3.22□□□□□ -1.89
SNX3O60493 RNU6-798P-201ENST00000516912 103 ntBASIC3.22□□□□□ -1.89
SNX3O60493 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX3O60493 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX3O60493 AL133271.1-201ENST00000538229 291 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX3O60493 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX3O60493 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX3O60493 AL022161.1-201ENST00000604390 213 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AC121247.2-201ENST00000604776 136 ntBASIC3.22□□□□□ -1.89
SNX3O60493 MLECP1-201ENST00000615893 709 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AC012150.2-201ENST00000621300 544 ntBASIC3.22□□□□□ -1.89
SNX3O60493 AL161637.1-201ENST00000622380 412 ntBASIC3.22□□□□□ -1.89
SNX3O60493 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNX3O60493 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX3O60493 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.89
SNX3O60493 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
SNX3O60493 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.21□□□□□ -1.9
SNX3O60493 RNU5E-8P-201ENST00000363502 116 ntBASIC3.21□□□□□ -1.9
SNX3O60493 RNA5SP51-201ENST00000364750 119 ntBASIC3.21□□□□□ -1.9
SNX3O60493 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.21□□□□□ -1.9
SNX3O60493 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AL021407.1-201ENST00000404531 386 ntBASIC3.21□□□□□ -1.9
SNX3O60493 CCNG1P1-201ENST00000406783 885 ntBASIC3.21□□□□□ -1.9
SNX3O60493 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
SNX3O60493 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX3O60493 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX3O60493 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX3O60493 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX3O60493 AP1S2P1-201ENST00000457344 379 ntBASIC3.21□□□□□ -1.9
SNX3O60493 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms