Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 AC092681.1-201ENST00000297369 291 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 Y_RNA.44-201ENST00000362676 108 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 SNORD113-8-201ENST00000363497 74 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ACTN4O43707 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 RNA5SP494-201ENST00000410653 129 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 RNU6-394P-201ENST00000410735 107 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 RNU2-18P-201ENST00000411224 162 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.2□□□□□ -1.42
ACTN4O43707 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC005363.1-201ENST00000530779 351 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.2□□□□□ -1.42
ACTN4O43707 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 AP000769.2-201ENST00000602344 396 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.2□□□□□ -1.42
ACTN4O43707 AC006329.2-201ENST00000611491 394 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 MIR6864-201ENST00000617935 70 ntBASIC6.2□□□□□ -1.42
ACTN4O43707 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.19□□□□□ -1.42
ACTN4O43707 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 MTND5P9-201ENST00000503854 1755 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ACTN4O43707 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 RNU6-288P-201ENST00000363690 104 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 Y_RNA.240-201ENST00000364469 95 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 RNU6-959P-201ENST00000384671 107 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.19□□□□□ -1.42
ACTN4O43707 RPS3AP2-201ENST00000407190 754 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 AC113412.1-201ENST00000425840 504 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 OR6D1P-201ENST00000436165 939 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 NUTF2P3-201ENST00000448540 384 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 AL445433.1-201ENST00000457507 257 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 RNU6-953P-201ENST00000459154 107 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.19□□□□□ -1.42
ACTN4O43707 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.19□□□□□ -1.42
ACTN4O43707 AC109479.2-201ENST00000517842 174 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC6.19□□□□□ -1.42
ACTN4O43707 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.19□□□□□ -1.42
ACTN4O43707 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.19□□□□□ -1.42
ACTN4O43707 MIR5696-201ENST00000578474 85 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 MIR4271-201ENST00000582451 67 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 MIR7853-201ENST00000584820 132 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 AC108738.1-201ENST00000603703 237 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.19□□□□□ -1.42
ACTN4O43707 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.19□□□□□ -1.42
ACTN4O43707 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.19□□□□□ -1.42
ACTN4O43707 AC123768.4-201ENST00000616244 701 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 MIR6071-201ENST00000616741 78 ntBASIC6.19□□□□□ -1.42
ACTN4O43707 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ACTN4O43707 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.18□□□□□ -1.42
ACTN4O43707 AC010266.2-201ENST00000564741 3255 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
ACTN4O43707 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ACTN4O43707 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ACTN4O43707 AP005435.3-201ENST00000531260 3198 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ACTN4O43707 Y_RNA.233-201ENST00000364407 101 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 Y_RNA.292-201ENST00000364904 97 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 SNORD56.6-201ENST00000384569 71 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 SNORA22C-201ENST00000384614 134 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 MIR323B-201ENST00000385269 82 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 AL662874.1-201ENST00000426065 230 ntBASIC6.18□□□□□ -1.42
ACTN4O43707 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.18□□□□□ -1.42
ACTN4O43707 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.18□□□□□ -1.42
ACTN4O43707 AC092573.2-201ENST00000434546 243 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms