Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CAB39P1-201ENST00000502277 460 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.96□□□□□ -1.94
RIPK2O43353 SCARNA15.2-201ENST00000516409 127 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 RNU6-928P-201ENST00000516876 104 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
RIPK2O43353 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 MIR5708-201ENST00000579723 85 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 AL606834.3-201ENST00000602615 496 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 AC084824.4-201ENST00000620106 731 ntBASIC2.96□□□□□ -1.94
RIPK2O43353 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RIPK2O43353 AL049641.1-201ENST00000441055 1948 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RIPK2O43353 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
RIPK2O43353 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RIPK2O43353 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RIPK2O43353 RNU1-109P-201ENST00000383960 147 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RNU6-925P-201ENST00000384629 104 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 MIR512-1-201ENST00000384913 84 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RNU6-298P-201ENST00000390888 96 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 SNORA57.1-201ENST00000391227 145 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 TAF9BP1-201ENST00000396646 746 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AL450338.1-201ENST00000407987 512 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RN7SKP202-201ENST00000410439 330 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 BX682237.1-201ENST00000415016 335 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RIPK2O43353 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 USP9YP22-201ENST00000438971 294 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 RPL39P40-201ENST00000445481 146 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RIPK2O43353 RPL23AP20-201ENST00000447965 421 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RN7SL293P-201ENST00000481765 281 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 TMEM251P1-201ENST00000503717 318 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC017037.2-201ENST00000513850 890 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.95□□□□□ -1.94
RIPK2O43353 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC118942.1-201ENST00000529674 1035 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC124947.2-202ENST00000552735 133 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
RIPK2O43353 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC015871.2-201ENST00000603605 948 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC013553.2-201ENST00000604244 589 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.95□□□□□ -1.94
RIPK2O43353 AC093673.2-201ENST00000609674 331 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RNU6-1192P-201ENST00000612197 107 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 RNU6-489P-201ENST00000618289 107 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 AC010608.3-201ENST00000625048 527 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 CDR1-202ENST00000625883 1485 ntBASIC2.95□□□□□ -1.94
RIPK2O43353 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RIPK2O43353 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.94□□□□□ -1.94
RIPK2O43353 MTCO1P9-201ENST00000505577 1534 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RIPK2O43353 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RIPK2O43353 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 AL672167.1-206ENST00000356293 943 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.94□□□□□ -1.94
RIPK2O43353 Z85995.1-201ENST00000415547 335 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 USP9YP21-201ENST00000420603 432 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AL139281.1-201ENST00000422120 335 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
RIPK2O43353 GTF2IP7-202ENST00000436677 309 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 PTGES3P1-201ENST00000439531 483 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 MTND2P20-201ENST00000440805 661 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC114322.1-201ENST00000506771 926 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 SNORA31.22-201ENST00000517204 135 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.94□□□□□ -1.94
RIPK2O43353 AC091057.3-201ENST00000602684 733 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AC069431.2-201ENST00000604149 1099 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AC011451.2-201ENST00000604303 598 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AC069545.1-201ENST00000605671 358 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 AL627309.6-201ENST00000606857 840 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.94□□□□□ -1.94
RIPK2O43353 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
RIPK2O43353 AL445984.1-201ENST00000637834 659 ntBASIC2.94□□□□□ -1.94
RIPK2O43353 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RIPK2O43353 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RIPK2O43353 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms