Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
MSH5O43196 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
MSH5O43196 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
MSH5O43196 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.24□□□□□ -0.93
MSH5O43196 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.24□□□□□ -0.93
MSH5O43196 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
MSH5O43196 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
MSH5O43196 RNA5SP188-201ENST00000362916 129 ntBASIC9.24□□□□□ -0.93
MSH5O43196 SNORA68-201ENST00000384437 133 ntBASIC9.24□□□□□ -0.93
MSH5O43196 snoU109.2-201ENST00000459316 135 ntBASIC9.24□□□□□ -0.93
MSH5O43196 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC9.24□□□□□ -0.93
MSH5O43196 SNORA70.11-201ENST00000515987 138 ntBASIC9.24□□□□□ -0.93
MSH5O43196 SNORA70.13-201ENST00000516116 138 ntBASIC9.24□□□□□ -0.93
MSH5O43196 AC087360.1-201ENST00000518788 616 ntBASIC9.24□□□□□ -0.93
MSH5O43196 IGLVIV-53-201ENST00000520107 367 ntBASIC9.24□□□□□ -0.93
MSH5O43196 AC005363.1-201ENST00000530779 351 ntBASIC9.24□□□□□ -0.93
MSH5O43196 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
MSH5O43196 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC9.24□□□□□ -0.93
MSH5O43196 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC9.24□□□□□ -0.93
MSH5O43196 RN7SL178P-201ENST00000582930 304 ntBASIC9.24□□□□□ -0.93
MSH5O43196 HYDIN2-203ENST00000614586 13885 ntBASIC9.24□□□□□ -0.93
MSH5O43196 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC9.24□□□□□ -0.93
MSH5O43196 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MSH5O43196 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC9.24□□□□□ -0.93
MSH5O43196 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
MSH5O43196 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 RNU6-1285P-201ENST00000363480 105 ntBASIC9.23□□□□□ -0.93
MSH5O43196 Y_RNA.243-201ENST00000364481 109 ntBASIC9.23□□□□□ -0.93
MSH5O43196 RNA5SP152-201ENST00000365184 110 ntBASIC9.23□□□□□ -0.93
MSH5O43196 SNORA64.3-201ENST00000365647 134 ntBASIC9.23□□□□□ -0.93
MSH5O43196 TRBV29OR9-2-201ENST00000427589 333 ntBASIC9.23□□□□□ -0.93
MSH5O43196 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC9.23□□□□□ -0.93
MSH5O43196 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC9.23□□□□□ -0.93
MSH5O43196 RNU6-113P-201ENST00000516653 101 ntBASIC9.23□□□□□ -0.93
MSH5O43196 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC9.23□□□□□ -0.93
MSH5O43196 RN7SL753P-201ENST00000581238 290 ntBASIC9.23□□□□□ -0.93
MSH5O43196 AL138880.2-201ENST00000616214 239 ntBASIC9.23□□□□□ -0.93
MSH5O43196 MIR548AY-201ENST00000617669 107 ntBASIC9.23□□□□□ -0.93
MSH5O43196 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC9.23□□□□□ -0.93
MSH5O43196 AC111152.1-202ENST00000635848 339 ntBASIC9.23□□□□□ -0.93
MSH5O43196 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC9.23□□□□□ -0.93
MSH5O43196 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MSH5O43196 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
MSH5O43196 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC9.23□□□□□ -0.93
MSH5O43196 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.22□□□□□ -0.93
MSH5O43196 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
MSH5O43196 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC9.22□□□□□ -0.93
MSH5O43196 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.22□□□□□ -0.93
MSH5O43196 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC9.22□□□□□ -0.93
MSH5O43196 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
MSH5O43196 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC9.22□□□□□ -0.93
MSH5O43196 AC068287.1-201ENST00000430283 295 ntBASIC9.22□□□□□ -0.93
MSH5O43196 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
MSH5O43196 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC9.22□□□□□ -0.93
MSH5O43196 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC9.22□□□□□ -0.93
MSH5O43196 snoU13.7-201ENST00000459220 104 ntBASIC9.22□□□□□ -0.93
MSH5O43196 RN7SL492P-201ENST00000460700 295 ntBASIC9.22□□□□□ -0.93
MSH5O43196 RN7SL83P-201ENST00000468131 297 ntBASIC9.22□□□□□ -0.93
MSH5O43196 RN7SL306P-201ENST00000492941 296 ntBASIC9.22□□□□□ -0.93
MSH5O43196 U7.4-201ENST00000614961 63 ntBASIC9.22□□□□□ -0.93
MSH5O43196 uc_338.29-201ENST00000615099 168 ntBASIC9.22□□□□□ -0.93
MSH5O43196 FAS-AS1.1-201ENST00000615327 126 ntBASIC9.22□□□□□ -0.93
MSH5O43196 AL591926.1-201ENST00000620542 217 ntBASIC9.22□□□□□ -0.93
MSH5O43196 MIR548BB-201ENST00000626714 66 ntBASIC9.22□□□□□ -0.93
MSH5O43196 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
MSH5O43196 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
MSH5O43196 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
MSH5O43196 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.93
MSH5O43196 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
MSH5O43196 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
MSH5O43196 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
MSH5O43196 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
MSH5O43196 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
MSH5O43196 MIR1275-201ENST00000408770 80 ntBASIC9.21□□□□□ -0.94
MSH5O43196 RNU2-70P-201ENST00000410718 179 ntBASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms