Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPS3P2-201ENST00000421346 701 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC009238.2-201ENST00000431026 355 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC006427.1-201ENST00000514359 712 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNU6-840P-201ENST00000517275 65 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 BDH2P1-201ENST00000602288 736 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 AC016727.2-201ENST00000603988 621 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 SNORD58B-201ENST00000607313 66 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 MIR15A-201ENST00000607334 83 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 U2.1-201ENST00000618978 145 ntBASIC4.54□□□□□ -1.68
SHISA3A0PJX4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHISA3A0PJX4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC090971.4-201ENST00000560291 1800 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNU6-1059P-201ENST00000363752 98 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNA5SP510-201ENST00000364697 99 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNU6-596P-201ENST00000365395 98 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 SSXP9-201ENST00000417503 292 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AL139148.1-201ENST00000427122 680 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RPS29P14-201ENST00000431518 171 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 Z92846.1-201ENST00000456203 268 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNU7-187P-201ENST00000458985 68 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC091180.1-201ENST00000462104 372 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RPL9P32-201ENST00000464118 620 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC104564.1-201ENST00000493028 407 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC073073.1-201ENST00000493920 463 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNU6-120P-201ENST00000516077 103 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNY3P15-201ENST00000516297 97 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RNA5SP271-201ENST00000516700 88 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC087369.1-201ENST00000520775 996 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RPL23AP53-201ENST00000521854 457 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC022882.1-201ENST00000532142 501 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC005868.1-201ENST00000536421 331 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC109446.1-201ENST00000566172 220 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 ELOCP5-201ENST00000604924 333 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC118658.2-201ENST00000618697 459 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 MAPK10-349ENST00000641767 3661 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHISA3A0PJX4 IRF5P1-201ENST00000504852 2164 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 AC005183.1-201ENST00000603687 1979 ntBASIC4.53□□□□□ -1.68
SHISA3A0PJX4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.69
SHISA3A0PJX4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SHISA3A0PJX4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SHISA3A0PJX4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC138393.1-203ENST00000327086 343 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RNU6-874P-201ENST00000362390 105 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RNU6-288P-201ENST00000363690 104 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.257-201ENST00000364596 102 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RNU6-450P-201ENST00000364654 107 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.307-201ENST00000365022 117 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RN7SKP269-201ENST00000365545 319 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RN7SKP126-201ENST00000411143 300 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms