Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA11.6-201ENST00000619030 128 ntBASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 BTBD10P1-201ENST00000549824 1352 ntBASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
DNMT3AQ9Y6K1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 snoU2_19.2-201ENST00000363024 80 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA23-201ENST00000365128 182 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RN7SKP186-201ENST00000365371 303 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-434P-201ENST00000384376 107 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MIR135A2-201ENST00000384854 100 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RNU11-201ENST00000387069 134 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 Y_RNA.626-201ENST00000411288 95 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 OR2AT2P-201ENST00000413438 905 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RAB28P5-201ENST00000427490 651 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RPL23AP69-201ENST00000431134 458 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL389925.1-201ENST00000432257 728 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL591704.1-201ENST00000432574 275 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL162725.1-201ENST00000435405 301 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC064862.4-201ENST00000442180 334 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RPS23P6-201ENST00000466136 431 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC007686.1-201ENST00000488511 463 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC026979.1-201ENST00000492525 396 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RPL7P47-201ENST00000497299 556 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA14.1-201ENST00000516113 141 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA43.3-201ENST00000517240 103 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MRPS18CP4-201ENST00000535821 231 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL360012.1-201ENST00000602813 131 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL390123.1-201ENST00000603216 237 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AL161423.1-201ENST00000613700 262 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 RBBP8P1-201ENST00000449447 1844 ntBASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3AQ9Y6K1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 Y_RNA.183-201ENST00000363882 113 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP435-201ENST00000364044 108 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 Y_RNA.240-201ENST00000364469 95 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP131-201ENST00000365452 119 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-611P-201ENST00000384276 104 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-393P-201ENST00000384475 107 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 Y_RNA.526-201ENST00000384572 110 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 SNORD70.1-201ENST00000391007 85 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA17A-201ENST00000391185 133 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP111-201ENST00000411386 101 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RN7SKP293-201ENST00000411389 296 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC016769.2-201ENST00000414815 475 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AL158071.1-201ENST00000430315 461 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 CYCSP51-201ENST00000443545 318 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AL161636.2-201ENST00000445179 927 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RPL7L1P1-201ENST00000448259 785 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC245028.2-201ENST00000458673 253 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNU7-167P-201ENST00000459160 62 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RN7SL273P-201ENST00000481561 299 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC110792.1-201ENST00000491826 472 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-1338P-201ENST00000516328 91 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms