Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 AC005046.1-201ENST00000608515 625 ntBASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 AL161629.2-201ENST00000615347 275 ntBASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 SNX18P10-201ENST00000625014 519 ntBASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 AL022323.4-201ENST00000623980 13120 ntBASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 GUCY1B2-204ENST00000531898 1979 ntBASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHGA4Q9Y5G9 SRRM1P3-201ENST00000426911 2678 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ZNF204P-201ENST00000416749 2397 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RNA5SP52-201ENST00000362448 134 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RNA5SP361-201ENST00000362686 118 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 SNORA22-201ENST00000383907 134 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-1144P-201ENST00000384247 104 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-376P-201ENST00000384731 106 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU1-139P-201ENST00000391307 165 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 MRPS21P5-201ENST00000417885 231 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AL391219.1-201ENST00000422570 483 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC007679.3-201ENST00000434035 414 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC112187.1-201ENST00000455837 479 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RN7SL72P-201ENST00000460697 269 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 APOOP4-201ENST00000513530 597 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RN7SKP179-201ENST00000516126 217 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 SNORA74.1-201ENST00000516320 180 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RN7SKP49-201ENST00000516675 260 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 Y_RNA.694-201ENST00000516677 117 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC011603.4-201ENST00000611325 277 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC068831.7-201ENST00000616954 363 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 MIR7854-201ENST00000620068 65 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 SCARNA4-201ENST00000629045 128 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AL591848.4-201ENST00000567832 3472 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 AC097461.1-201ENST00000568928 2821 ntBASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA4Q9Y5G9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 FTLP6-201ENST00000355274 422 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 Y_RNA.33-201ENST00000362591 102 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-821P-201ENST00000390995 107 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AL929472.1-201ENST00000417484 429 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC099782.1-201ENST00000425889 474 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC090804.1-201ENST00000448870 490 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 RN7SL39P-201ENST00000462264 297 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC083906.1-201ENST00000509298 406 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 Y_RNA.797-201ENST00000515977 94 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-1114P-201ENST00000516022 107 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 RNU6-168P-201ENST00000516189 101 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC090281.1-201ENST00000523019 276 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC090022.1-201ENST00000546569 311 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC005476.1-201ENST00000554427 397 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC023968.1-201ENST00000560719 475 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 MIR4431-201ENST00000579990 94 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 MIR4502-201ENST00000580432 81 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC008121.1-201ENST00000603244 268 ntBASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 PARP4P2-201ENST00000446672 3326 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms