Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 SNORD116-25-201ENST00000516517 92 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 NPIPB1P-202ENST00000588786 828 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC011487.3-201ENST00000593607 453 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC011445.2-201ENST00000599274 173 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SNORD91B-202ENST00000608459 222 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 AC245014.3-201ENST00000618589 347 ntBASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB3Q9Y5E6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 SNORA21-201ENST00000362423 132 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RNU5B-2P-201ENST00000363036 113 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 Y_RNA.127-201ENST00000363386 109 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP114-201ENST00000410327 279 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RPL21P40-201ENST00000428586 483 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 HMGB1P27-201ENST00000431429 603 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC002553.3-201ENST00000453002 341 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SL214P-201ENST00000487317 265 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC010409.1-201ENST00000487382 476 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 EDDM3DP-201ENST00000554692 434 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 OR4H12P-201ENST00000556269 907 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC112693.2-201ENST00000556538 232 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC027229.1-201ENST00000583887 253 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AP000787.2-201ENST00000604432 568 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 MIR4679-1-201ENST00000637619 75 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 AC087516.1-201ENST00000561236 2428 ntBASIC5.93□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AL161756.3-201ENST00000641216 2071 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AC109446.4-201ENST00000623235 2755 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 MIR323A-201ENST00000362199 86 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNA5SP110-201ENST00000362638 115 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-37P-201ENST00000362692 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 SNORD1C-201ENST00000363315 78 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-11P-201ENST00000364234 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-7-201ENST00000364784 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-8-201ENST00000365467 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP81-201ENST00000365603 331 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-25P-201ENST00000383873 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-1-201ENST00000383898 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-926P-201ENST00000384075 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-36P-201ENST00000384172 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-4P-201ENST00000384205 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-5P-201ENST00000384238 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-3P-201ENST00000384314 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-16P-201ENST00000384385 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-15P-201ENST00000384534 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-2-201ENST00000384627 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-29P-201ENST00000384637 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-9-201ENST00000384776 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU11-201ENST00000387069 134 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AC092447.6-201ENST00000414578 210 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 OOSP1P1-201ENST00000423265 274 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 TOMM20P4-201ENST00000427861 435 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AC112187.1-201ENST00000455837 479 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 NXT1P1-201ENST00000458481 316 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-1333P-201ENST00000516162 93 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 SCARNA21.2-201ENST00000516600 166 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNA5SP271-201ENST00000516700 88 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms