Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 HSPE1P11-201ENST00000339579 310 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 Y_RNA.296-201ENST00000364930 108 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RNU6-1215P-201ENST00000384441 102 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 MIR659-201ENST00000384963 97 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 Y_RNA.599-201ENST00000410489 109 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RNA5SP306-201ENST00000411087 107 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AF274854.1-201ENST00000413236 615 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 MTCO2P11-201ENST00000431069 680 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 HMGB1P12-201ENST00000438594 598 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC122718.1-201ENST00000439448 744 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 TXNP1-201ENST00000441872 371 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 NUTF2P3-201ENST00000448540 384 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RPS27AP17-201ENST00000463344 455 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 FAM133DP-201ENST00000464802 691 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RPL21P126-201ENST00000470049 478 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RPS4XP13-201ENST00000483219 789 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RPL9P33-201ENST00000484311 566 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RN7SL810P-201ENST00000493031 276 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC104164.2-201ENST00000496953 495 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 HMGB1P29-201ENST00000505659 499 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 FTH1P9-201ENST00000513251 355 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 MTCO1P35-201ENST00000515270 228 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RNU6-840P-201ENST00000517275 65 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC090572.1-201ENST00000519251 160 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 ARL2BPP2-201ENST00000550907 489 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC007424.1-203ENST00000554613 687 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 RPL23AP84-201ENST00000571193 464 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AP001029.3-201ENST00000588063 596 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC012603.1-201ENST00000606424 528 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AL445567.2-201ENST00000618935 498 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 CR848007.1-201ENST00000442354 1699 ntBASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LSM4Q9Y4Z0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU6-282P-201ENST00000365357 103 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU1-39P-201ENST00000383897 165 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 SNORA37-201ENST00000384504 129 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 MIR3065-201ENST00000390137 79 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 SNORA48.7-201ENST00000391302 135 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 MIR1290-201ENST00000408735 78 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL031779.1-201ENST00000415663 330 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL161631.1-201ENST00000417933 486 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 CYCSP43-201ENST00000438233 310 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RPS20P20-201ENST00000460498 340 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RPL9P6-201ENST00000492764 598 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC023194.1-201ENST00000493084 308 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RN7SL812P-201ENST00000493791 279 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU6-390P-201ENST00000516259 103 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms