Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC008507.1-201ENST00000587506 734 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC026790.2-201ENST00000606282 430 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AP002826.1-201ENST00000608835 315 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AL607023.1-201ENST00000620045 248 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC103706.2-201ENST00000638080 240 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 AC021755.1-201ENST00000559747 1447 ntBASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.92
ATG4BQ9Y4P1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AL161781.1-201ENST00000354277 403 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC063979.1-201ENST00000415539 377 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC010099.3-201ENST00000423896 409 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 SNRPEP7-201ENST00000438350 220 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MTND5P14-201ENST00000441481 1267 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AL591503.2-201ENST00000442314 1005 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RPL17P49-201ENST00000443728 411 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC104563.1-201ENST00000476147 376 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC112673.1-201ENST00000513168 575 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RNA5SP216-201ENST00000516111 123 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC105185.1-201ENST00000518705 535 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 RPL12P22-201ENST00000519073 490 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 IGHV3-76-201ENST00000522465 295 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 ERHP1-201ENST00000523006 310 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 FAM60DP-201ENST00000524174 632 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC239860.2-201ENST00000525886 270 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC037471.2-201ENST00000564941 598 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 OR4K8P-201ENST00000578842 1048 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC011451.2-201ENST00000604303 598 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AL133507.1-201ENST00000605269 557 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC009570.1-201ENST00000609599 745 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC063944.3-201ENST00000609969 533 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC009464.1-201ENST00000615731 469 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC068831.7-201ENST00000616954 363 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 AC002076.2-201ENST00000617362 122 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.08□□□□□ -1.92
ATG4BQ9Y4P1 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 U3.19-201ENST00000390893 196 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 SKINT1L-201ENST00000401057 817 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RPS3AP12-201ENST00000443616 753 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RAC1P7-201ENST00000445367 377 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 MTND1P31-201ENST00000449206 961 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms