Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC018552.1-201ENST00000562099 811 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 SNORD39.2-201ENST00000579995 76 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 MIR3146-201ENST00000580367 79 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC068790.3-201ENST00000602988 553 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AL161616.1-201ENST00000611867 286 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 HSPA8P1-201ENST00000425843 1833 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 GVINP1-202ENST00000531871 7271 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC092747.4-201ENST00000620519 1861 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 TRIM51GP-201ENST00000534741 1350 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RNU1-146P-201ENST00000364015 165 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-853P-201ENST00000364306 107 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RNA5SP205-201ENST00000364653 136 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-744P-201ENST00000365557 107 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 Y_RNA.471-201ENST00000384312 102 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 MIR589-201ENST00000385238 99 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC097374.1-203ENST00000400783 485 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AL445305.1-201ENST00000432577 575 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 HMGB3P21-201ENST00000452483 547 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 DEFB108E-201ENST00000524692 240 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC091516.1-201ENST00000549191 703 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AL031320.1-201ENST00000604177 357 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC104465.1-201ENST00000611365 139 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 AC007996.1-201ENST00000620414 2821 ntBASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.6□□□□□ -1.35
PDZRN3Q9UPQ7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RNU1-32P-201ENST00000363937 159 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-115P-201ENST00000364310 107 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-611P-201ENST00000384276 104 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 SNORA51.11-201ENST00000384442 131 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 MIR215-201ENST00000384858 110 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 MIR558-201ENST00000384920 94 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 SNORA53-201ENST00000391141 249 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 MIR1182-201ENST00000408363 97 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 MIR1303-201ENST00000408625 86 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RPL31P45-201ENST00000419532 356 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 OR2AM1P-201ENST00000422137 422 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 HMGN2P27-201ENST00000427352 270 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RBMY2TP-201ENST00000451162 947 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 snoU13.20-201ENST00000459180 104 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AC087477.1-201ENST00000465747 340 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AC114982.1-201ENST00000469402 321 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AP001025.2-201ENST00000490908 477 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 Y_RNA.662-201ENST00000516028 97 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RPL21P12-201ENST00000559810 515 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AL355877.2-201ENST00000603670 358 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AL138820.1-201ENST00000617901 5305 ntBASIC6.59□□□□□ -1.35
PDZRN3Q9UPQ7 AL606537.1-201ENST00000607258 2011 ntBASIC6.59□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC244517.1-201ENST00000606030 2086 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 U3.3-201ENST00000362986 216 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-251P-201ENST00000363235 104 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-47P-201ENST00000383866 107 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 Y_RNA.526-201ENST00000384572 110 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-306P-201ENST00000384617 107 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 PRRC2CP1-201ENST00000404428 159 ntBASIC6.58□□□□□ -1.36
PDZRN3Q9UPQ7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms