Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC091042.1-201ENST00000579213 173 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MIR3671-201ENST00000580455 88 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MIR3667-201ENST00000581025 74 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 PRPF19P1-201ENST00000584766 898 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC098657.3-201ENST00000620434 263 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC243312.2-201ENST00000623340 601 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC110801.1-201ENST00000623590 212 ntBASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDC42EP3Q9UKI2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 LINC01355-201ENST00000566551 5444 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-1252P-201ENST00000363054 104 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.399-201ENST00000383955 105 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 Y_RNA.445-201ENST00000384168 102 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 MIR135A2-201ENST00000384854 100 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 MIR1182-201ENST00000408363 97 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP27-201ENST00000410684 333 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RNU6-370P-201ENST00000411008 104 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 VDAC1P9-201ENST00000412766 841 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 ELOCP24-201ENST00000456370 334 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL591473.1-201ENST00000464297 313 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RPL23AP55-201ENST00000498163 452 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 IRF5P1-201ENST00000504852 2164 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 COX6B1P5-201ENST00000509843 249 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RPL39P5-202ENST00000512505 151 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RN7SKP24-201ENST00000515888 284 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC022634.1-201ENST00000520765 532 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RANP3-201ENST00000530970 276 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC107918.3-201ENST00000533272 382 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC135001.1-201ENST00000544546 283 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC006349.1-201ENST00000555526 235 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL161713.1-201ENST00000555538 145 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 MTCO3P23-201ENST00000561363 289 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC136624.4-201ENST00000573044 370 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 MIR4790-201ENST00000577799 79 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC209154.1-201ENST00000582156 337 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 MIR4691-201ENST00000583764 85 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC068790.4-201ENST00000602474 263 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL162431.4-201ENST00000604674 411 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AL034351.1-201ENST00000605288 668 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC083809.1-201ENST00000615051 472 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 uc_338.22-201ENST00000622722 187 ntBASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.25□□□□□ -1.73
CDC42EP3Q9UKI2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDC42EP3Q9UKI2 U3.3-201ENST00000362986 216 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms