Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 SYF2P1-201ENST00000550658 413 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 HSPE1P5-201ENST00000561489 272 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC005951.2-201ENST00000576282 495 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC106900.2-201ENST00000604994 317 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC245389.1-201ENST00000605141 529 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AP000860.1-201ENST00000605250 559 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 SDR42E1P2-201ENST00000614861 481 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC072046.2-201ENST00000618366 268 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC006338.1-201ENST00000618453 749 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC007546.1-201ENST00000619452 559 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC026585.1-201ENST00000619582 524 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC005086.4-201ENST00000623065 213 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AL732618.1-201ENST00000623251 301 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AL359715.5-201ENST00000623431 443 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LRFN1Q9P244 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN1Q9P244 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN1Q9P244 EOGT-210ENST00000615922 1931 ntBASIC3.9□□□□□ -1.78
LRFN1Q9P244 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LRFN1Q9P244 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN1Q9P244 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 RN7SKP280-201ENST00000364196 304 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 U3.11-201ENST00000364476 212 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 RNA5SP104-201ENST00000410989 118 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 RAC1P3-201ENST00000416129 580 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 NDUFB4P7-201ENST00000423198 363 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN1Q9P244 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL451062.2-201ENST00000427515 271 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 USP9YP14-201ENST00000430663 563 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 USP9YP28-201ENST00000435142 589 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 RPL23AP46-201ENST00000438548 490 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 HSFY6P-201ENST00000445573 403 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL136380.1-201ENST00000447970 162 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC140076.1-201ENST00000449897 361 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL359385.1-201ENST00000456509 365 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 SNRPGP3-201ENST00000469405 227 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC010631.1-201ENST00000474150 156 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC114797.1-201ENST00000514003 728 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC099522.1-202ENST00000514718 367 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 RNU1-61P-201ENST00000516107 151 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 SCARNA15.2-201ENST00000516409 127 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 Vault.3-201ENST00000516676 95 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 RNU6-430P-201ENST00000517078 107 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC011979.2-201ENST00000527568 352 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 OR8R1P-201ENST00000543943 764 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC069240.1-201ENST00000548774 375 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL355836.1-201ENST00000555951 870 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 RPL23AP84-201ENST00000571193 464 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC005332.10-201ENST00000612725 619 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC091834.1-201ENST00000614543 472 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 AC010133.1-201ENST00000615809 842 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 AL392088.2-201ENST00000637607 285 ntBASIC3.9□□□□□ -1.79
LRFN1Q9P244 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
LRFN1Q9P244 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN1Q9P244 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LRFN1Q9P244 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN1Q9P244 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC002546.1-201ENST00000588041 2504 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN1Q9P244 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN1Q9P244 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LRFN1Q9P244 U3.42-201ENST00000408746 214 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 RNU6-195P-201ENST00000411352 109 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 ARPC3P1-201ENST00000437218 533 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 RN7SKP13-201ENST00000515933 244 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC006064.5-201ENST00000541782 248 ntBASIC3.89□□□□□ -1.79
LRFN1Q9P244 AC093012.1-202ENST00000549403 582 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms