Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG3Q9NT62 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ATG3Q9NT62 AL451142.2-201ENST00000429076 2090 ntBASIC5.65□□□□□ -1.51
ATG3Q9NT62 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG3Q9NT62 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.65□□□□□ -1.51
ATG3Q9NT62 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU6-251P-201ENST00000363235 104 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNA5SP130-201ENST00000364431 114 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 Y_RNA.476-201ENST00000384347 108 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU4-70P-201ENST00000384579 139 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU6-952P-201ENST00000391164 108 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 MTCYBP4-201ENST00000401524 249 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AL121834.1-202ENST00000404494 277 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU6-985P-201ENST00000410182 104 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RN7SKP235-201ENST00000410662 305 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RN7SKP247-201ENST00000411094 308 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC078974.1-201ENST00000411597 223 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RPS12P24-201ENST00000412619 387 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 MRPS31P2-201ENST00000451581 518 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 MTND3P16-201ENST00000452205 344 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 BTF3P15-201ENST00000455606 336 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 CEACAMP4-201ENST00000457676 421 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AL162395.1-201ENST00000457882 422 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU7-63P-201ENST00000459054 62 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AP002812.1-201ENST00000495378 474 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RFPL4AP5-201ENST00000514977 504 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNA5SP519-201ENST00000516480 119 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC090572.1-201ENST00000519251 160 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AL389895.1-201ENST00000554127 252 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC053481.3-201ENST00000577881 843 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC073539.2-201ENST00000597113 165 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RPL7P50-201ENST00000600588 727 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 RNU6-89P-201ENST00000606519 100 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 MIR8069-1-201ENST00000616627 86 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 MIR8069-2-201ENST00000621412 86 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 AC091953.2-201ENST00000623979 160 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 ASNSP3-201ENST00000451989 1306 ntBASIC5.64□□□□□ -1.51
ATG3Q9NT62 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
ATG3Q9NT62 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATG3Q9NT62 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 MAPK10-286ENST00000641208 8747 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 Y_RNA.187-201ENST00000363918 113 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 RNU6-730P-201ENST00000383954 104 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC097374.1-203ENST00000400783 485 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 MIR921-201ENST00000401133 56 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 RPL31P52-201ENST00000407532 367 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 RN7SKP202-201ENST00000410439 330 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AL353777.1-201ENST00000425552 326 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 GEMIN8P3-201ENST00000445417 720 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 HMGB3P22-202ENST00000451823 572 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 U8.20-201ENST00000459445 131 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 RN7SL132P-201ENST00000478131 296 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC026801.2-201ENST00000515352 425 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 OR5B10P-201ENST00000532869 642 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 BNIP3P6-201ENST00000549284 499 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 RMST_9.1-201ENST00000619945 193 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 AC112200.1-201ENST00000625015 234 ntBASIC5.63□□□□□ -1.51
ATG3Q9NT62 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms