Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU6-880P-201ENST00000384526 107 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RNU6-541P-201ENST00000384709 110 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 MIR329-1-201ENST00000385028 80 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RNU6-763P-201ENST00000390865 106 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RNU2-21P-201ENST00000410368 188 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 MRPS21P2-201ENST00000424704 264 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 SNRPCP3-201ENST00000474888 476 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 AP002453.1-201ENST00000492327 668 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RPL23AP49-201ENST00000492925 468 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RN7SKP35-201ENST00000517210 151 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 AC010547.6-201ENST00000571789 193 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 RPSAP75-201ENST00000605848 301 ntBASIC9.55□□□□□ -0.88
SCAF1Q9H7N4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 AC109446.4-201ENST00000623235 2755 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 RNU6-281P-201ENST00000384212 103 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 RNU6-1145P-201ENST00000384246 107 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 RNU6-106P-201ENST00000384405 107 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 MIR548A1-201ENST00000385041 97 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 MIR153-2-201ENST00000385225 87 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 KRTAP8-2P-201ENST00000440620 186 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 AL450023.1-201ENST00000450868 751 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 SCARNA8-201ENST00000515924 131 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 AC008507.3-201ENST00000585753 472 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 AC048347.1-201ENST00000624621 427 ntBASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
SCAF1Q9H7N4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 MIR105-2-201ENST00000385083 81 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 BTF3L4P2-201ENST00000392798 346 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 RN7SKP271-201ENST00000410528 320 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 RPL30P3-201ENST00000424262 333 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC245884.2-201ENST00000426257 404 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC092017.2-201ENST00000427600 362 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC126120.1-201ENST00000431082 470 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 PFN1P11-201ENST00000445829 389 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 RPL7L1P1-201ENST00000448259 785 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC002553.3-201ENST00000453002 341 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 RPS4XP13-201ENST00000483219 789 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 RN7SKP12-201ENST00000516275 143 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC005191.1-201ENST00000603950 358 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 AC004832.5-201ENST00000608677 401 ntBASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCAF1Q9H7N4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC9.52□□□□□ -0.88
SCAF1Q9H7N4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
SCAF1Q9H7N4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
SCAF1Q9H7N4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 RNU6-643P-201ENST00000384018 107 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 Y_RNA.521-201ENST00000384560 114 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 RNU6-813P-201ENST00000384691 107 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 Y_RNA.572-201ENST00000384757 98 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 MIR541-201ENST00000401360 84 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 HLFP1-201ENST00000402375 499 ntBASIC9.52□□□□□ -0.89
SCAF1Q9H7N4 CYCSP49-201ENST00000420810 319 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms