Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01347-201ENST00000417964 355 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 USP9YP20-201ENST00000419224 558 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 IPO7P1-201ENST00000442031 636 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC097499.1-201ENST00000444277 208 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 HIGD1AP2-201ENST00000446367 280 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AL031183.1-201ENST00000457667 207 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC126182.1-201ENST00000478134 357 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC025768.1-201ENST00000510057 267 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 C1DP5-201ENST00000525775 383 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AL391156.1-201ENST00000554965 554 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AP001004.1-201ENST00000582468 324 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 SUMO2P14-201ENST00000604488 293 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC009570.1-201ENST00000609599 745 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 AC106028.5-201ENST00000610332 395 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 PISRT1-201ENST00000626175 531 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.44□□□□□ -2.02
TRIM4Q9C037 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 MIR1287-201ENST00000408492 90 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AL135786.1-201ENST00000415892 214 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC079804.2-201ENST00000490376 200 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 MTCO3P44-201ENST00000510977 541 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC104997.1-201ENST00000519761 717 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC243972.3-201ENST00000539655 198 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC044913.1-201ENST00000557200 430 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM4Q9C037 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AL355810.1-201ENST00000614629 552 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 U6.107-201ENST00000637108 79 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC123912.3-201ENST00000600907 1367 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AP000526.1-201ENST00000603308 1388 ntBASIC2.43□□□□□ -2.02
TRIM4Q9C037 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.43□□□□□ -2.02
TRIM4Q9C037 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM4Q9C037 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM4Q9C037 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AL596028.1-201ENST00000326971 197 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 RNA5SP252-201ENST00000391131 119 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 RPLP0P7-201ENST00000416050 667 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 RPL21P32-201ENST00000419877 477 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AL513321.1-201ENST00000441175 761 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC004865.1-201ENST00000442276 1003 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC008280.2-201ENST00000455473 307 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 GTF2IP9-201ENST00000502460 301 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC008885.2-201ENST00000509506 930 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 SNORA31.13-201ENST00000516624 135 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AP000867.2-201ENST00000532468 320 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 OR5BN1P-201ENST00000532955 829 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM4Q9C037 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC092470.1-201ENST00000546187 132 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.42□□□□□ -2.02
TRIM4Q9C037 AC011460.1-201ENST00000636268 1834 ntBASIC2.42□□□□□ -2.02
TRIM4Q9C037 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 SGO1P2-201ENST00000429458 1589 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 SNORD62.1-201ENST00000362541 86 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 RNU6-339P-201ENST00000384310 107 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 VTA1P1-201ENST00000414044 866 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TRIM4Q9C037 FNDC3CP-201ENST00000420795 1155 ntBASIC2.41□□□□□ -2.02
TRIM4Q9C037 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.41□□□□□ -2.02
TRIM4Q9C037 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms