Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AC018529.3-201ENST00000624212 2254 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 LINC01355-201ENST00000566551 5444 ntBASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LCE3DQ9BYE3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 SRRM1P3-201ENST00000426911 2678 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP185-201ENST00000362813 326 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNU6-227P-201ENST00000362865 103 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 SNORD50.1-201ENST00000362987 71 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP224-201ENST00000364140 325 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP227-201ENST00000364445 330 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 SNORA43.1-201ENST00000364863 140 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RN7SKP130-201ENST00000364924 301 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNA5SP455-201ENST00000365190 119 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 SNORD115-46-201ENST00000390982 71 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNU1-56P-201ENST00000391303 164 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 HSPA8P15-201ENST00000401676 786 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNU6-1203P-201ENST00000410703 110 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNU2-25P-201ENST00000411041 191 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AC079809.1-201ENST00000415468 276 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RAC1P3-201ENST00000416129 580 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AC244098.2-201ENST00000422068 99 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 TOMM20P4-201ENST00000427861 435 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AP000907.1-201ENST00000428428 510 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 MTND3P9-201ENST00000429526 346 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 NIP7P1-201ENST00000433227 512 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 KRTAP2-5P-201ENST00000446109 396 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AP006222.1-205ENST00000450734 457 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 AL136097.1-201ENST00000456945 913 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 ACA64.4-201ENST00000459070 127 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RNU1-88P-201ENST00000459274 128 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RPS29P27-201ENST00000463711 170 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 MED28P2-201ENST00000475771 317 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RPL23AP45-201ENST00000476406 468 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RPL7AP56-201ENST00000476420 791 ntBASIC1.6□□□□□ -2.15
LCE3DQ9BYE3 RN7SL282P-201ENST00000479676 297 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms