Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC002075.2-201ENST00000425207 252 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC092648.1-201ENST00000425870 423 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 RPS25P9-201ENST00000435591 252 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC092155.2-201ENST00000454675 477 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC093663.1-201ENST00000497190 394 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC114967.1-201ENST00000504890 259 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC011611.1-201ENST00000552179 197 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 NCAPGP2-201ENST00000557911 754 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC020895.1-201ENST00000595362 272 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 VN1R82P-201ENST00000601481 356 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AL391001.1-201ENST00000602747 715 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC024220.1-201ENST00000603675 484 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC019159.1-201ENST00000605094 187 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AC002064.3-201ENST00000623448 346 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 AP003399.1-201ENST00000637534 361 ntBASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4AQ9BY43 CR381670.1-201ENST00000624291 1693 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 U3.19-201ENST00000390893 196 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 RN7SKP266-201ENST00000410232 287 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 HSFY7P-201ENST00000432672 318 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 HSFY8P-201ENST00000437934 318 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 HSFY5P-201ENST00000453726 309 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 snoU13.28-201ENST00000459235 104 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC147055.4-201ENST00000504399 745 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC087373.1-201ENST00000524920 491 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC034105.3-201ENST00000565294 442 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 MIR3922-201ENST00000585192 84 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 BNIP3P38-201ENST00000601117 544 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC093838.1-201ENST00000613014 469 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AL603758.1-201ENST00000618654 241 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC012314.7-201ENST00000619693 93 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 U4.6-201ENST00000621618 127 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC019226.1-201ENST00000625666 515 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 PCMTD1P7-201ENST00000634506 357 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 AC110079.1-202ENST00000635213 138 ntBASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4AQ9BY43 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 SNORA63.1-201ENST00000362493 131 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 SNORA23-201ENST00000365128 182 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 RNU6-432P-201ENST00000384196 109 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 RNU6-193P-201ENST00000410977 107 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC092047.1-201ENST00000424997 240 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 PRSS3P4-201ENST00000453323 162 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC093809.1-201ENST00000509155 340 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 SNORA70.18-201ENST00000516696 98 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AP006245.1-201ENST00000522549 120 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC023813.2-201ENST00000564321 469 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC244100.1-202ENST00000621554 382 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC103798.2-201ENST00000624292 632 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC032011.1-201ENST00000611703 1549 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AL021368.2-201ENST00000606125 5352 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 AC017071.1-201ENST00000564407 2204 ntBASIC4.44□□□□□ -1.7
CHMP4AQ9BY43 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AC093010.3-201ENST00000570269 15214 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 RIOK3P1-201ENST00000418778 1528 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 RNU6-114P-201ENST00000384704 105 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 SNORD17-201ENST00000390930 237 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 MIR320C1-201ENST00000408566 88 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AP000907.1-201ENST00000428428 510 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AC097713.2-201ENST00000430199 356 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AL162389.1-201ENST00000449233 177 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 ATG12P2-201ENST00000456830 416 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms