Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR5701-1-201ENST00000585138 82 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC008962.1-201ENST00000605729 304 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC005520.5-201ENST00000613926 164 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 MIR5701-2-201ENST00000615634 82 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC008957.3-201ENST00000624112 2242 ntBASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL25A1Q9BXS0 AC116158.1-201ENST00000560231 2129 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC110373.1-201ENST00000505994 3505 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC245100.2-201ENST00000454544 1679 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.44-201ENST00000362676 108 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RNU4-44P-201ENST00000363050 141 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP428-201ENST00000365129 132 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RNU6-790P-201ENST00000384479 105 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.580-201ENST00000391004 95 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RPL23AP38-201ENST00000423801 469 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 MRPS21P2-201ENST00000424704 264 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RPS27AP3-201ENST00000453803 454 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 ACA59.1-201ENST00000515966 143 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RN7SKP96-201ENST00000516948 297 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AL133271.1-201ENST00000538229 291 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AL158827.2-201ENST00000602494 330 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC023043.4-201ENST00000612081 449 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AL691447.3-201ENST00000635020 330 ntBASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL25A1Q9BXS0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 THAP12P9-201ENST00000503971 2360 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AP001148.1-201ENST00000624124 2359 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 Y_RNA.261-201ENST00000364631 102 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 RNU6-1325P-201ENST00000364905 105 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 RNU6-946P-201ENST00000383878 107 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AL030996.1-201ENST00000411430 235 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 RBMY2TP-201ENST00000451162 947 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC112187.1-201ENST00000455837 479 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC005798.1-201ENST00000513715 387 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 RN7SKP260-201ENST00000516907 149 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 RNA5SP170-201ENST00000517150 101 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC100870.1-201ENST00000522035 505 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 MIR4301-201ENST00000577203 66 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 AL592148.3-201ENST00000608771 2646 ntBASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL25A1Q9BXS0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms