Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC055855.1-201ENST00000489563 579 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC083906.5-201ENST00000503722 328 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC008885.1-201ENST00000514930 301 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RNU6-488P-201ENST00000515918 99 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RNU5F-8P-201ENST00000515941 111 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RN7SKP132-201ENST00000516001 208 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RNU6-798P-201ENST00000516912 103 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC022616.2-201ENST00000523185 300 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 C1DP5-201ENST00000525775 383 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AL450472.3-201ENST00000615578 367 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 MIR6730-201ENST00000622213 67 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 OR4G2P-202ENST00000641004 1759 ntBASIC1.56□□□□□ -2.16
VPS25Q9BRG1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS25Q9BRG1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RNU1-33P-201ENST00000364249 162 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RNU6-234P-201ENST00000365229 104 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 FABP12P1-201ENST00000401911 322 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AL359511.1-201ENST00000402970 211 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC093106.2-201ENST00000428212 385 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC112220.1-201ENST00000434628 355 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 Z75741.1-201ENST00000446793 314 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC005002.1-201ENST00000447458 540 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RPL31P60-201ENST00000478450 367 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC093663.2-201ENST00000484625 313 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC112518.2-201ENST00000508565 425 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RNU6-1095P-201ENST00000516148 108 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RN7SKP57-201ENST00000517248 293 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC010186.2-204ENST00000537668 439 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 MIR5680-201ENST00000577577 84 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC067959.1-201ENST00000604334 379 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC079791.1-201ENST00000605356 973 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC055876.5-201ENST00000605667 259 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC093838.1-201ENST00000613014 469 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS25Q9BRG1 ELF2P3-201ENST00000445099 1506 ntBASIC1.55□□□□□ -2.16
VPS25Q9BRG1 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 SNORA54-201ENST00000384281 123 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 MIR585-201ENST00000384887 94 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL109913.1-201ENST00000421173 514 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 Z80107.1-201ENST00000436830 412 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 IFNA20P-201ENST00000436840 528 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AP005639.2-201ENST00000527592 928 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 CBX3P7-201ENST00000532876 502 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 HSBP1P1-201ENST00000555205 166 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 H3F3AP1-201ENST00000559984 334 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 AC040168.1-201ENST00000623594 991 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS25Q9BRG1 ADAM3A-203ENST00000461344 2157 ntBASIC1.54□□□□□ -2.16
VPS25Q9BRG1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 SNORA11C-201ENST00000408532 129 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 RPS7P9-201ENST00000414704 586 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC008280.1-201ENST00000418851 412 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC099548.1-201ENST00000421443 426 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
VPS25Q9BRG1 ZNF833P-201ENST00000424938 1494 ntBASIC1.53□□□□□ -2.16
VPS25Q9BRG1 AC011816.1-201ENST00000441346 546 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms