Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RNA5SP257-201ENST00000363023 116 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 RNU4-51P-201ENST00000364206 140 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AL138785.1-201ENST00000425821 331 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC007560.1-201ENST00000426912 237 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC011979.1-201ENST00000472300 483 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AF131216.2-201ENST00000512316 564 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC087468.1-201ENST00000604365 630 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC098679.5-201ENST00000624394 571 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC066616.2-201ENST00000559334 1481 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AL121972.1-201ENST00000402023 252 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 HMGN2P19-201ENST00000425149 265 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 SEPT7P3-201ENST00000455017 621 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 MIR98-201ENST00000606724 119 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC090970.3-201ENST00000612566 866 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 HMGB1P12-201ENST00000438594 598 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 USP9YP10-201ENST00000454868 628 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC006023.2-201ENST00000609916 167 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 AC025016.1-201ENST00000616746 682 ntBASIC1.41□□□□□ -2.18
CSMD1Q96PZ7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.4□□□□□ -2.18
CSMD1Q96PZ7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.4□□□□□ -2.18
CSMD1Q96PZ7 DDX43P2-201ENST00000604753 1354 ntBASIC1.4□□□□□ -2.18
CSMD1Q96PZ7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 RNU4-41P-201ENST00000364426 143 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 XKRYP4-201ENST00000414395 483 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 XKRYP5-201ENST00000449659 483 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 DUXAP8-207ENST00000456786 622 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 MTATP6P3-201ENST00000581686 676 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 AC008687.2-201ENST00000597865 520 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 MIR4448-201ENST00000584360 86 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 OR4G11P-202ENST00000642116 1414 ntBASIC1.4□□□□□ -2.19
CSMD1Q96PZ7 RNA5SP138-201ENST00000365098 114 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC078918.1-201ENST00000498515 228 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 SUMO2P6-201ENST00000505273 288 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC109446.2-201ENST00000567872 497 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC007687.1-201ENST00000602704 304 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 VIS1.1-201ENST00000610517 203 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC012321.1-201ENST00000561622 1588 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 RNU6-115P-201ENST00000364310 107 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 SNORD6-201ENST00000365444 73 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 BTBD10P2-201ENST00000404779 676 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC138649.5-201ENST00000637456 137 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 HMGB3P2-201ENST00000411913 584 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 FNDC3CP-201ENST00000420795 1155 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC005517.2-201ENST00000424673 553 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AL049830.2-201ENST00000480072 201 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AC096772.1-201ENST00000609146 564 ntBASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
CSMD1Q96PZ7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 RFC5P1-201ENST00000454419 874 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC007342.9-201ENST00000623877 1385 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 RNU6-492P-201ENST00000363035 104 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC073310.1-201ENST00000423226 1033 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 RPS29P29-201ENST00000456396 171 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 HMGN1P8-201ENST00000463578 288 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AC079804.2-201ENST00000490376 200 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 CALM1P1-201ENST00000442082 433 ntBASIC1.38□□□□□ -2.19
CSMD1Q96PZ7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms